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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ydgH and ydgI are separated by 185 nucleotides
ydgI and folM are separated by 36 nucleotides
folM and ydgC overlap by 4 nucleotides
ydgC and rstA are separated by 128 nucleotides
MCAODC_17725: ydgH - DUF1471 domain-containing protein, at 407,497 to 408,441
ydgH
MCAODC_17730: ydgI - Putative arginine/ornithine antiporter, at 408,627 to 410,009
ydgI
MCAODC_17735: folM - dihydromonapterin reductase, at 410,046 to 410,768
folM
MCAODC_17740: ydgC - Inner membrane protein YdgC, at 410,765 to 411,100
ydgC
MCAODC_17745: rstA - two-component system response regulator RstA, at 411,229 to 411,948
rstA
Group
Condition
MCAODC
_17725
MCAODC
_17730
MCAODC
_17735
MCAODC
_17740
MCAODC
_17745
ydgH
ydgI
folM
ydgC
rstA
carbon source
Casamino-acids
+0.1
-0.4
-0.6
-1.5
-0.9
phage
EV240
-1.1
-0.1
-0.5
-0.8
-0.3
phage
EV240
-0.3
-0.1
-1.0
-1.4
+0.3
phage
WM_TP9
-0.3
-0.0
-0.8
-1.2
+0.1
carbon source
Sodium-DL-Lactate
-0.3
-0.4
-0.2
-0.6
-0.1
phage
TP9
+0.2
-0.3
-0.1
-1.8
+0.4
no phage control
Control_ECRC101_WM
-0.3
-0.0
-0.0
-0.7
-0.2
phage
WM_EV240
-0.3
-0.4
-0.8
+0.2
+0.3
phage
WM_TP9
+0.1
+0.2
-0.7
-0.6
+0.2
carbon source
Casamino-acids
+0.2
-0.5
-0.2
+0.8
-0.8
phage
Bas09
-0.1
-0.4
+0.1
+0.3
-0.3
phage
WM_Bas41
+0.3
-0.1
-0.0
-0.8
+0.1
phage
WM_RB68
-0.1
-0.1
+0.0
-0.6
+0.5
carbon source
L-Arabinose
-0.0
-0.2
+0.7
-0.7
+0.1
phage
WM_Bas14
-0.2
+0.3
+0.3
-0.7
+0.3
phage
Bas09
-0.0
-0.0
-0.3
+0.3
-0.1
phage
Bas14
+0.3
+0.6
+0.4
-1.0
-0.2
phage
WM_EV240
-0.8
+0.6
+0.3
-0.4
+0.5
carbon source
Sodium-DL-Lactate
+0.2
-0.2
+0.7
-0.3
-0.1
carbon source
D-Glucose
+0.1
-0.1
+0.5
-0.3
+0.2
phage
Bas14
-0.2
+0.6
+0.4
-0.3
+0.1
no phage control
Control_ECRC101_WM
-0.2
-0.2
+0.2
-0.1
+1.1
phage
WM_Bas09
-0.1
+0.2
+0.3
+0.3
+0.4
phage
WM_Bas09
+0.1
+0.1
+0.6
+0.2
+0.3
carbon source
D-Glucose
-0.1
+0.0
+0.6
+0.7
+0.1
carbon source
L-Arabinose
+0.6
-0.1
+1.4
+1.1
-0.0
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