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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ydgD and mdtI are separated by 38 nucleotides
mdtI and mdtJ overlap by 14 nucleotides
mdtJ and tqsA are separated by 411 nucleotides
tqsA and pntB are separated by 24 nucleotides
MCAODC_17695: ydgD - Uncharacterized serine protease YdgD, at 401,030 to 401,851
ydgD
MCAODC_17700: mdtI - multidrug/spermidine efflux SMR transporter subunit MdtI, at 401,890 to 402,219
mdtI
MCAODC_17705: mdtJ - multidrug/spermidine efflux SMR transporter subunit MdtJ, at 402,206 to 402,571
mdtJ
MCAODC_17710: tqsA - AI-2 transporter TqsA, at 402,983 to 404,017
tqsA
MCAODC_17715: pntB - Re/Si-specific NAD(P)(+) transhydrogenase subunit beta, at 404,042 to 405,430
pntB
Group
Condition
MCAODC
_17695
MCAODC
_17700
MCAODC
_17705
MCAODC
_17710
MCAODC
_17715
ydgD
mdtI
mdtJ
tqsA
pntB
phage
EV240
-0.6
+0.0
+0.2
-0.2
-0.4
carbon source
Casamino-acids
-1.2
+1.3
-0.6
+0.1
-0.5
phage
Bas09
-0.4
+0.1
-0.2
-0.1
+0.0
phage
Bas14
-0.9
-0.0
+1.0
-0.8
+0.3
no phage control
Control_ECRC101_WM
-0.4
-1.0
+0.7
+0.4
+0.0
phage
WM_EV240
-0.5
-0.1
+0.8
-0.2
-0.1
phage
WM_Bas09
-0.2
+0.0
+0.0
+0.4
-0.2
phage
Bas09
-0.2
-0.1
+1.0
-0.5
-0.0
no phage control
Control_ECRC101_WM
-0.2
+0.4
-0.1
-0.1
+0.1
phage
WM_Bas41
-0.0
+0.7
+0.1
-0.6
+0.1
phage
WM_Bas14
-0.0
+0.1
+0.3
+0.2
-0.1
carbon source
D-Glucose
-0.3
+0.7
+0.8
+0.0
-0.8
phage
WM_Bas09
+0.1
+0.3
+0.7
-0.3
-0.2
carbon source
D-Glucose
-0.6
+1.5
+0.1
-0.1
-0.0
phage
WM_RB68
-0.2
+1.0
-0.1
+0.4
-0.2
phage
Bas14
-0.3
+1.0
+0.1
+0.3
-0.1
phage
EV240
-0.2
+1.8
+0.3
-0.4
-0.2
phage
WM_TP9
-0.4
+1.5
-0.3
+0.4
+0.2
phage
TP9
-0.0
+0.9
+1.1
-0.3
-0.4
phage
WM_TP9
+0.3
+0.4
+0.3
+0.2
+0.1
carbon source
L-Arabinose
-0.2
+2.0
-0.6
+0.4
+0.1
carbon source
Sodium-DL-Lactate
-0.5
+1.7
+0.3
+0.6
-0.4
carbon source
Casamino-acids
+0.0
+0.9
+0.6
+0.6
-0.3
carbon source
Sodium-DL-Lactate
-0.6
+2.5
+0.2
+0.4
-0.3
phage
WM_EV240
-0.6
+1.9
+1.1
+0.4
-0.4
carbon source
L-Arabinose
-0.1
+1.1
+0.8
+0.7
+0.2
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