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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
dmsB and ynfH are separated by 1 nucleotides
ynfH and dmsD are separated by 42 nucleotides
dmsD and clcB are separated by 193 nucleotides
clcB and bioD overlap by 48 nucleotides
MCAODC_17645: dmsB - dimethylsulfoxide reductase subunit B, at 392,061 to 392,678
dmsB
MCAODC_17650: ynfH - Anaerobic dimethyl sulfoxide reductase chain YnfH, at 392,680 to 393,534
ynfH
MCAODC_17655: dmsD - Tat proofreading chaperone DmsD, at 393,577 to 394,191
dmsD
MCAODC_17660: clcB - voltage-gated ClC-type chloride channel ClcB, at 394,385 to 395,641
clcB
MCAODC_17665: bioD - dethiobiotin synthase, at 395,594 to 396,289
bioD
Group
Condition
MCAODC
_17645
MCAODC
_17650
MCAODC
_17655
MCAODC
_17660
MCAODC
_17665
dmsB
ynfH
dmsD
clcB
bioD
carbon source
D-Glucose
-0.1
+0.1
-3.7
-0.1
N.D.
phage
Bas14
-0.2
-0.0
-2.8
+0.4
N.D.
carbon source
Casamino-acids
-1.0
+0.1
-0.5
+0.1
N.D.
phage
Bas14
-0.3
-0.2
-1.3
+0.4
N.D.
carbon source
L-Arabinose
-1.7
+0.1
+0.3
+0.2
N.D.
phage
EV240
-0.2
+0.0
-0.4
+0.0
N.D.
phage
Bas09
-0.4
-0.2
+0.0
+0.1
N.D.
carbon source
D-Glucose
-0.6
+0.3
+0.3
-0.3
N.D.
phage
TP9
+0.4
-0.2
-0.2
-0.1
N.D.
carbon source
Casamino-acids
-0.4
-0.3
+0.3
+0.3
N.D.
phage
WM_EV240
+0.4
-0.3
-0.3
+0.3
N.D.
phage
Bas09
+0.2
+0.1
+0.6
-0.6
N.D.
no phage control
Control_ECRC101_WM
+0.0
-0.2
+0.3
+0.0
N.D.
phage
WM_TP9
+0.2
-0.0
-0.4
+0.5
N.D.
carbon source
L-Arabinose
-0.2
+0.3
-0.2
+0.4
N.D.
phage
WM_Bas14
-0.2
-0.3
+1.2
-0.1
N.D.
phage
WM_TP9
+0.7
-0.0
+0.0
-0.1
N.D.
phage
WM_EV240
+0.8
-0.2
+0.2
-0.0
N.D.
phage
WM_Bas09
+0.2
+0.3
-0.1
+0.3
N.D.
carbon source
Sodium-DL-Lactate
+0.2
+0.2
+0.1
+0.5
N.D.
phage
WM_Bas09
+0.1
-0.1
+0.9
+0.2
N.D.
phage
WM_RB68
-0.1
+0.1
+1.3
-0.1
N.D.
phage
WM_Bas41
+0.4
-0.1
+1.1
-0.1
N.D.
carbon source
Sodium-DL-Lactate
+0.3
+0.3
+0.8
-0.0
N.D.
phage
EV240
+0.2
-0.0
+0.8
+0.4
N.D.
no phage control
Control_ECRC101_WM
+0.3
+0.3
+0.9
+0.5
N.D.
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