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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ynfB and speG are separated by 34 nucleotides
speG and ynfC are separated by 2 nucleotides
ynfC and MCAODC_17630 are separated by 71 nucleotides
MCAODC_17630 and ynfE are separated by 198 nucleotides
MCAODC_17615: ynfB - DUF1283 domain-containing protein, at 384,879 to 385,220
ynfB
MCAODC_17620: speG - spermidine N1-acetyltransferase, at 385,255 to 385,815
speG
MCAODC_17625: ynfC - YnfC family lipoprotein, at 385,818 to 386,564
ynfC
MCAODC_17630: MCAODC_17630 - DUF1161 domain-containing protein, at 386,636 to 386,941
_17630
MCAODC_17635: ynfE - Putative dimethyl sulfoxide reductase chain YnfE, at 387,140 to 389,566
ynfE
Group
Condition
MCAODC
_17615
MCAODC
_17620
MCAODC
_17625
MCAODC
_17630
MCAODC
_17635
ynfB
speG
ynfC
ynfE
phage
WM_EV240
-0.7
+0.2
-0.4
-1.9
+0.2
carbon source
Sodium-DL-Lactate
-2.9
+0.3
-0.2
+0.2
+0.2
no phage control
Control_ECRC101_WM
-0.3
-0.0
-0.4
-0.6
-0.2
carbon source
L-Arabinose
-0.9
+0.0
-0.8
+0.5
+0.2
carbon source
Casamino-acids
-0.4
+0.0
-0.7
+0.1
+0.2
phage
WM_Bas14
+0.1
+0.3
-0.4
-0.5
-0.3
carbon source
Casamino-acids
-1.4
+0.3
+0.6
+0.1
-0.1
phage
WM_Bas41
+1.4
-0.0
-0.4
-1.0
-0.2
phage
WM_EV240
+0.1
-0.3
+0.1
-0.4
+0.2
no phage control
Control_ECRC101_WM
+0.3
-0.4
-0.2
-0.1
+0.1
phage
Bas09
-0.1
+0.5
-0.8
+0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.1
-0.5
+0.1
phage
EV240
-1.7
+0.9
+0.3
+0.1
+0.5
phage
WM_TP9
+0.7
+0.2
-0.5
-0.1
+0.1
phage
WM_RB68
-0.0
+0.3
+0.0
+0.2
-0.0
phage
WM_Bas09
-0.1
+0.2
-0.2
+0.4
+0.2
carbon source
D-Glucose
-0.5
+0.1
+0.7
+0.3
+0.3
phage
WM_TP9
+0.4
+0.2
-0.5
+0.9
-0.0
phage
WM_Bas09
+0.5
+0.4
+0.6
-0.2
+0.1
phage
Bas09
+0.9
+0.9
-0.1
-0.2
+0.1
carbon source
D-Glucose
+0.5
+0.3
-0.4
+0.8
+0.4
phage
EV240
+0.2
+1.2
-0.8
+1.1
+0.1
phage
TP9
+1.1
+0.5
-0.2
+0.8
+0.3
carbon source
L-Arabinose
+1.5
+0.4
+0.7
+0.2
-0.1
phage
Bas14
+1.4
+1.1
+1.0
-0.6
+0.2
phage
Bas14
+2.0
+1.0
+1.1
+0.2
+0.3
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MCAODC_17625
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