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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
tnp-IS3 and MCAODC_17590 overlap by 35 nucleotides
MCAODC_17590 and MCAODC_17595 are separated by 87 nucleotides
MCAODC_17595 and MCAODC_17600 are separated by 34 nucleotides
MCAODC_17600 and MCAODC_17605 are separated by 500 nucleotides
MCAODC_17585: tnp-IS3 - IS3 family transposase, at 380,783 to 381,670
tnp-IS3
MCAODC_17590: MCAODC_17590 - exodeoxyribonuclease VIII, at 381,636 to 383,105
_17590
MCAODC_17595: MCAODC_17595 - DNA-binding protein, at 383,193 to 383,429
_17595
MCAODC_17600: MCAODC_17600 - Integrase, cryptic prophage CP-933P, at 383,464 to 383,619
_17600
MCAODC_17605: MCAODC_17605 - Starvation-sensing protein, at 384,120 to 384,212
_17605
Group
Condition
MCAODC
_17585
MCAODC
_17590
MCAODC
_17595
MCAODC
_17600
MCAODC
_17605
tnp-IS3
phage
WM_EV240
N.D.
-1.5
-0.4
-0.4
N.D.
phage
TP9
N.D.
-0.4
-0.7
-0.7
N.D.
phage
EV240
N.D.
+0.1
-1.0
-0.9
N.D.
phage
WM_Bas09
N.D.
-0.0
-0.5
-0.5
N.D.
phage
EV240
N.D.
-0.1
+0.3
-1.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.3
-0.1
-0.3
N.D.
phage
WM_EV240
N.D.
+0.0
-0.3
-0.4
N.D.
phage
Bas09
N.D.
+0.2
-0.4
-0.1
N.D.
carbon source
L-Arabinose
N.D.
+0.1
-0.5
+0.0
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.2
+0.8
-1.0
N.D.
phage
WM_Bas09
N.D.
+0.1
-0.0
-0.4
N.D.
phage
Bas09
N.D.
+0.2
+0.2
-0.6
N.D.
phage
WM_Bas41
N.D.
-0.3
+0.1
+0.0
N.D.
no phage control
Control_ECRC101_WM
N.D.
+0.2
-0.3
-0.1
N.D.
carbon source
Casamino-acids
N.D.
-0.7
-0.5
+1.2
N.D.
phage
WM_Bas14
N.D.
+0.4
+0.1
-0.2
N.D.
phage
WM_TP9
N.D.
+0.0
+0.5
-0.2
N.D.
phage
WM_RB68
N.D.
+0.0
+0.4
-0.1
N.D.
phage
Bas14
N.D.
-0.6
+0.7
+0.3
N.D.
carbon source
Casamino-acids
N.D.
+0.2
-0.3
+0.6
N.D.
phage
WM_TP9
N.D.
+0.1
+0.4
+0.1
N.D.
no phage control
Control_ECRC101_WM
N.D.
+0.7
+0.5
-0.5
N.D.
carbon source
D-Glucose
N.D.
+0.7
+0.0
+0.1
N.D.
phage
Bas14
N.D.
+0.3
+0.1
+0.5
N.D.
carbon source
D-Glucose
N.D.
-0.3
+0.3
+0.9
N.D.
carbon source
L-Arabinose
N.D.
+0.3
+0.5
+0.2
N.D.
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