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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_17050 and MCAODC_17055 are separated by 44 nucleotides
MCAODC_17055 and MCAODC_17060 overlap by 56 nucleotides
MCAODC_17060 and MCAODC_17065 are separated by 4 nucleotides
MCAODC_17065 and MCAODC_17070 are separated by 447 nucleotides
MCAODC_17050: MCAODC_17050 - hypothetical protein, at 315,767 to 315,988
_17050
MCAODC_17055: MCAODC_17055 - Peptidase U35, phage prohead HK97, at 316,033 to 316,587
_17055
MCAODC_17060: MCAODC_17060 - DUF1327 domain-containing protein, at 316,532 to 316,939
_17060
MCAODC_17065: MCAODC_17065 - holin, at 316,944 to 317,150
_17065
MCAODC_17070: MCAODC_17070 - 9-O-acetyl-N-acetylneuraminic acid deacetylase, at 317,598 to 319,448
_17070
Group
Condition
MCAODC
_17050
MCAODC
_17055
MCAODC
_17060
MCAODC
_17065
MCAODC
_17070
phage
TP9
N.D.
+0.2
-2.4
N.D.
N.D.
phage
WM_Bas09
N.D.
-0.2
-1.2
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.7
-0.6
N.D.
N.D.
carbon source
D-Glucose
N.D.
+0.1
-1.3
N.D.
N.D.
phage
EV240
N.D.
+0.1
-1.1
N.D.
N.D.
phage
WM_Bas09
N.D.
-0.3
-0.5
N.D.
N.D.
phage
WM_TP9
N.D.
-0.3
-0.4
N.D.
N.D.
phage
WM_TP9
N.D.
+0.1
-0.6
N.D.
N.D.
carbon source
L-Arabinose
N.D.
-0.2
-0.3
N.D.
N.D.
carbon source
Casamino-acids
N.D.
-0.1
-0.1
N.D.
N.D.
phage
WM_RB68
N.D.
+0.2
-0.3
N.D.
N.D.
no phage control
Control_ECRC101_WM
N.D.
+0.1
-0.0
N.D.
N.D.
phage
WM_EV240
N.D.
-0.0
+0.1
N.D.
N.D.
phage
WM_Bas41
N.D.
-0.0
+0.2
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.7
+0.9
N.D.
N.D.
phage
Bas09
N.D.
+0.8
-0.6
N.D.
N.D.
carbon source
D-Glucose
N.D.
-0.1
+0.4
N.D.
N.D.
phage
WM_Bas14
N.D.
+0.3
+0.2
N.D.
N.D.
phage
Bas14
N.D.
-0.2
+0.7
N.D.
N.D.
no phage control
Control_ECRC101_WM
N.D.
+0.6
+0.0
N.D.
N.D.
carbon source
Casamino-acids
N.D.
+0.3
+0.5
N.D.
N.D.
phage
Bas09
N.D.
-0.2
+1.0
N.D.
N.D.
phage
Bas14
N.D.
-0.1
+1.0
N.D.
N.D.
phage
WM_EV240
N.D.
+0.2
+0.7
N.D.
N.D.
carbon source
L-Arabinose
N.D.
-0.2
+1.3
N.D.
N.D.
phage
EV240
N.D.
-0.2
+1.3
N.D.
N.D.
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