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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ftrA and mgtS are separated by 107 nucleotides
mgtS and dgcZ are separated by 218 nucleotides
dgcZ and ydeI are separated by 254 nucleotides
ydeI and ydeJ are separated by 275 nucleotides
MCAODC_16875: ftrA - transcriptional regulator FtrA, at 285,035 to 286,006
ftrA
MCAODC_16880: mgtS - protein MgtS, at 286,114 to 286,209
mgtS
MCAODC_16890: dgcZ - diguanylate cyclase DgcZ, at 286,428 to 287,318
dgcZ
MCAODC_16895: ydeI - YdeI family stress tolerance OB fold protein, at 287,573 to 287,965
ydeI
MCAODC_16900: ydeJ - 2-oxo-tetronate isomerase, at 288,241 to 288,759
ydeJ
Group
Condition
MCAODC
_16875
MCAODC
_16880
MCAODC
_16890
MCAODC
_16895
MCAODC
_16900
ftrA
mgtS
dgcZ
ydeI
ydeJ
carbon source
L-Arabinose
-0.3
+0.5
-1.4
-3.3
+0.1
phage
EV240
+0.1
-0.9
-0.0
-0.3
-0.9
no phage control
Control_ECRC101_WM
-0.8
+0.2
-0.2
-0.9
+0.2
phage
Bas14
-0.0
-0.7
+0.0
-1.1
+0.4
phage
WM_TP9
+0.1
+0.1
+0.0
-0.5
-0.7
carbon source
Casamino-acids
-0.4
+0.1
-0.0
-0.0
-0.5
phage
WM_Bas09
+0.4
+0.6
-1.8
-0.1
+0.4
phage
EV240
+0.4
-0.0
+0.3
-1.7
+0.4
phage
Bas09
+0.1
-1.3
+0.1
+0.2
+0.5
carbon source
L-Arabinose
-0.3
+0.2
+0.1
+0.1
-0.4
carbon source
D-Glucose
-0.6
+0.3
+0.0
-0.1
+0.0
phage
WM_EV240
+0.2
+0.3
-1.0
+0.7
-0.4
phage
Bas14
-0.3
-1.0
+0.5
-0.2
+0.9
phage
WM_TP9
-0.1
+1.1
-0.8
-0.3
+0.1
phage
WM_Bas41
+0.2
+1.0
-0.1
-0.8
-0.3
phage
Bas09
+0.4
+0.6
+0.0
-1.0
+0.2
no phage control
Control_ECRC101_WM
-0.3
+0.5
+0.1
+0.2
-0.3
phage
TP9
+0.2
-0.7
-0.1
+0.4
+0.4
phage
WM_EV240
-1.0
+1.2
-0.2
+0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.1
+0.2
+0.6
-0.1
carbon source
Casamino-acids
+0.4
+0.3
+0.1
-0.0
-0.1
phage
WM_Bas09
-0.4
+1.0
+0.1
-0.1
+0.0
phage
WM_RB68
+0.5
+1.1
+0.1
-1.3
+0.3
phage
WM_Bas14
+0.2
+0.4
+0.0
+0.2
-0.0
carbon source
D-Glucose
-0.2
+0.4
+0.5
+0.6
-0.2
carbon source
Sodium-DL-Lactate
-0.2
+0.5
+0.1
+0.6
+0.6
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