Fitness for 5 genes in Escherichia coli ECRC101

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500 ntlsrF and lsrG are separated by 23 nucleotideslsrG and tam are separated by 56 nucleotidestam and yneE are separated by 3 nucleotidesyneE and uxaB are separated by 196 nucleotides MCAODC_16775: lsrF - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 267,596 to 268,471 lsrF MCAODC_16780: lsrG - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 268,495 to 268,785 lsrG MCAODC_16785: tam - trans-aconitate 2-methyltransferase, at 268,842 to 269,600 tam MCAODC_16790: yneE - UPF0187 protein YneE, at 269,604 to 270,518 yneE MCAODC_16795: uxaB - tagaturonate reductase, at 270,715 to 272,166 uxaB
Group Condition MCAODC_16775 MCAODC_16780 MCAODC_16785 MCAODC_16790 MCAODC_16795
lsrF lsrG tam yneE uxaB
carbon source Sodium-DL-Lactate -2.3 N.D. -0.1 +0.4 -0.3
phage WM_Bas41 -1.0 N.D. -0.8 +0.2 -0.6
carbon source D-Glucose -0.6 N.D. -0.4 -1.0 -0.1
phage TP9 -0.1 N.D. -0.7 +0.1 -0.6
carbon source Sodium-DL-Lactate -0.5 N.D. -0.5 +0.4 +0.2
phage Bas09 +0.2 N.D. -0.2 +0.5 -0.9
carbon source L-Arabinose -0.1 N.D. -0.4 +0.2 +0.0
carbon source D-Glucose -1.1 N.D. +0.3 +0.4 +0.2
phage EV240 -0.9 N.D. -0.0 +0.7 +0.1
carbon source Casamino-acids -0.3 N.D. -0.2 +0.1 +0.3
carbon source L-Arabinose -0.3 N.D. +0.0 +0.3 -0.1
phage WM_TP9 +0.3 N.D. -0.2 +0.5 -0.4
phage Bas14 -0.1 N.D. +0.0 +0.7 -0.5
phage WM_EV240 +0.2 N.D. -0.5 +0.1 +0.4
phage WM_Bas09 +0.1 N.D. +0.3 -0.3 +0.2
no phage control Control_ECRC101_WM +0.4 N.D. -0.2 +0.1 +0.1
phage WM_RB68 +0.3 N.D. +0.2 +0.3 -0.5
phage WM_EV240 -0.6 N.D. -0.2 +0.8 +0.4
carbon source Casamino-acids -0.2 N.D. +0.5 +0.4 -0.2
phage WM_Bas09 +0.6 N.D. -0.2 -0.2 +0.4
phage Bas09 +0.3 N.D. -0.1 +0.6 -0.0
phage WM_Bas14 +0.4 N.D. +0.2 -0.2 +0.4
phage Bas14 -0.7 N.D. -0.1 +1.5 +0.1
phage WM_TP9 +0.3 N.D. +0.3 +0.6 +0.2
phage EV240 +0.3 N.D. -0.0 +0.9 +0.2
no phage control Control_ECRC101_WM +0.3 N.D. +0.5 +0.3 +0.3
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