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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ydeP and ydeQ are separated by 333 nucleotides
ydeQ and ydeR are separated by 59 nucleotides
ydeR and ydeS are separated by 12 nucleotides
ydeS and fimA are separated by 13 nucleotides
MCAODC_16695: ydeP - acid resistance putative oxidoreductase YdeP, at 243,026 to 245,305
ydeP
MCAODC_16700: ydeQ - Uncharacterized fimbrial-like protein YdeQ, at 245,639 to 246,553
ydeQ
MCAODC_16705: ydeR - Uncharacterized fimbrial-like protein YdeR, at 246,613 to 247,116
ydeR
MCAODC_16710: ydeS - Uncharacterized fimbrial-like protein YdeS, at 247,129 to 247,659
ydeS
MCAODC_16715: fimA - type 1 fimbrial major subunit FimA, at 247,673 to 250,324
fimA
Group
Condition
MCAODC
_16695
MCAODC
_16700
MCAODC
_16705
MCAODC
_16710
MCAODC
_16715
ydeP
ydeQ
ydeR
ydeS
fimA
carbon source
Casamino-acids
-0.4
-0.6
-0.9
-0.7
-0.1
phage
TP9
-0.0
-0.7
-0.0
-1.3
-0.3
phage
WM_Bas41
+0.2
+0.3
-2.0
-0.3
-0.4
carbon source
Sodium-DL-Lactate
-0.0
-0.3
-0.6
-1.1
+0.1
phage
Bas09
+0.3
-0.6
+0.7
-1.7
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.6
+0.0
-0.4
-0.3
phage
Bas09
-0.1
-0.0
-0.5
+0.1
-0.5
phage
WM_Bas09
-0.0
-0.1
-0.5
-0.2
-0.0
phage
WM_TP9
-0.0
-0.1
-0.6
+0.4
-0.4
carbon source
L-Arabinose
-0.2
-0.0
-0.5
-0.1
+0.3
no phage control
Control_ECRC101_WM
-0.0
+0.1
-0.5
-0.0
-0.0
carbon source
D-Glucose
+0.1
+0.4
-0.5
+0.0
-0.6
carbon source
Casamino-acids
-0.0
-0.0
-0.1
-0.1
-0.3
carbon source
D-Glucose
+0.2
+0.1
-0.0
-0.4
-0.3
carbon source
L-Arabinose
-0.1
-0.4
+1.0
-1.1
+0.3
phage
WM_EV240
-0.2
+0.3
-1.0
+0.6
-0.0
phage
EV240
+0.3
-1.3
+0.8
-0.3
+0.1
phage
WM_RB68
-0.1
+0.5
-0.9
-0.0
+0.3
phage
WM_Bas09
-0.1
+0.2
-0.0
-0.7
+0.5
no phage control
Control_ECRC101_WM
+0.1
+0.4
+0.4
-0.7
-0.1
phage
WM_Bas14
+0.2
+0.3
+0.1
-0.5
+0.2
phage
WM_TP9
-0.1
+0.4
-0.3
+0.1
+0.1
phage
Bas14
+0.1
+0.4
+0.3
-0.2
-0.2
phage
WM_EV240
+0.0
+0.9
+0.0
-0.5
-0.1
phage
EV240
+0.1
-0.6
+0.1
+0.4
+0.5
phage
Bas14
+0.2
+0.5
+0.4
+0.4
+0.1
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