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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ydeN and ydeO are separated by 403 nucleotides
ydeO and safA are separated by 73 nucleotides
safA and ydeP are separated by 247 nucleotides
ydeP and ydeQ are separated by 333 nucleotides
MCAODC_16680: ydeN - Uncharacterized sulfatase YdeN, at 239,870 to 241,342
ydeN
MCAODC_16685: ydeO - acid stress response transcriptional regulator YdeO, at 241,746 to 242,507
ydeO
MCAODC_16690: safA - two-component system connector SafA, at 242,581 to 242,778
safA
MCAODC_16695: ydeP - acid resistance putative oxidoreductase YdeP, at 243,026 to 245,305
ydeP
MCAODC_16700: ydeQ - Uncharacterized fimbrial-like protein YdeQ, at 245,639 to 246,553
ydeQ
Group
Condition
MCAODC
_16680
MCAODC
_16685
MCAODC
_16690
MCAODC
_16695
MCAODC
_16700
ydeN
ydeO
safA
ydeP
ydeQ
phage
TP9
-0.5
+0.3
N.D.
-0.0
-0.7
carbon source
Casamino-acids
-0.3
+0.5
N.D.
-0.4
-0.6
phage
WM_EV240
-1.0
+0.1
N.D.
-0.2
+0.3
carbon source
Casamino-acids
-0.7
+0.1
N.D.
-0.0
-0.0
carbon source
L-Arabinose
+0.2
-0.1
N.D.
-0.1
-0.4
carbon source
Sodium-DL-Lactate
-0.1
+0.0
N.D.
-0.0
-0.3
phage
WM_TP9
-0.4
-0.2
N.D.
-0.1
+0.4
carbon source
Sodium-DL-Lactate
+0.4
+0.0
N.D.
-0.1
-0.6
phage
Bas09
-0.3
+0.3
N.D.
-0.1
-0.0
phage
EV240
-0.5
+1.4
N.D.
+0.3
-1.3
no phage control
Control_ECRC101_WM
+0.4
-0.9
N.D.
+0.1
+0.4
carbon source
D-Glucose
-0.1
-0.3
N.D.
+0.2
+0.1
phage
WM_TP9
-0.3
+0.5
N.D.
-0.0
-0.1
no phage control
Control_ECRC101_WM
+0.0
+0.1
N.D.
-0.0
+0.1
phage
WM_Bas41
-0.3
-0.0
N.D.
+0.2
+0.3
phage
EV240
-0.4
+1.1
N.D.
+0.1
-0.6
phage
WM_Bas09
+0.6
-0.3
N.D.
-0.0
-0.1
phage
Bas09
-0.3
+0.8
N.D.
+0.3
-0.6
phage
WM_RB68
-0.1
+0.0
N.D.
-0.1
+0.5
carbon source
L-Arabinose
+0.7
-0.1
N.D.
-0.2
-0.0
phage
WM_Bas09
-0.5
+0.7
N.D.
-0.1
+0.2
carbon source
D-Glucose
-0.1
-0.0
N.D.
+0.1
+0.4
phage
WM_Bas14
-0.1
+0.5
N.D.
+0.2
+0.3
phage
WM_EV240
+0.3
-0.1
N.D.
+0.0
+0.9
phage
Bas14
+0.4
+0.2
N.D.
+0.2
+0.5
phage
Bas14
+0.3
+1.4
N.D.
+0.1
+0.4
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