Fitness for 5 genes in Escherichia coli ECRC101

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500 ntgadB and pqqL are separated by 360 nucleotidespqqL and yddB are separated by 56 nucleotidesyddB and yddA are separated by 37 nucleotidesyddA and ydeM are separated by 317 nucleotides MCAODC_16655: gadB - glutamate decarboxylase, at 229,464 to 230,864 gadB MCAODC_16660: pqqL - putative zinc protease PqqL, at 231,225 to 234,008 pqqL MCAODC_16665: yddB - Uncharacterized protein YddB, at 234,065 to 236,437 yddB MCAODC_16670: yddA - Inner membrane ABC transporter ATP-binding protein YddA, at 236,475 to 238,133 yddA MCAODC_16675: ydeM - anaerobic sulfatase maturase, at 238,451 to 239,608 ydeM
Group Condition MCAODC_16655 MCAODC_16660 MCAODC_16665 MCAODC_16670 MCAODC_16675
gadB pqqL yddB yddA ydeM
carbon source L-Arabinose -0.3 -0.4 -0.1 -0.3 -3.8
carbon source Casamino-acids -0.7 +0.1 -0.0 +0.2 -3.9
phage WM_Bas09 -0.0 -0.0 +0.0 -0.4 -2.4
phage WM_Bas41 +0.4 -0.1 +0.1 -0.3 -2.6
phage EV240 -0.0 +0.1 -0.0 -0.0 -2.1
carbon source Sodium-DL-Lactate +0.5 -0.2 +0.1 +0.7 -2.7
carbon source D-Glucose +0.0 +0.0 -0.0 +0.5 -1.8
carbon source Casamino-acids -0.5 +0.1 +0.0 +0.3 -1.2
phage Bas14 +1.1 -0.5 -0.1 +0.5 -2.0
carbon source L-Arabinose -0.1 -0.5 +0.1 -0.4 +0.1
phage EV240 +0.6 +0.1 +0.2 +0.3 -2.0
phage Bas14 -0.6 +0.3 -0.1 +1.2 -1.3
phage WM_EV240 +0.4 +0.0 +0.1 -0.7 -0.1
phage WM_TP9 -0.0 +0.0 +0.0 +0.3 -0.6
phage WM_RB68 +0.1 -0.1 -0.0 +0.2 -0.5
phage WM_TP9 -0.1 -0.1 -0.0 +0.6 -0.7
phage TP9 +1.0 +0.3 -0.6 +0.2 -1.1
no phage control Control_ECRC101_WM +0.2 -0.3 +0.0 -0.0 +0.1
carbon source D-Glucose +0.3 +0.1 +0.0 +0.1 +0.0
phage Bas09 +0.5 +0.4 +0.1 +0.1 -0.7
phage WM_EV240 -0.4 -0.5 +0.3 +0.1 +1.0
phage WM_Bas14 +0.0 -0.2 +0.2 +0.6 +0.0
carbon source Sodium-DL-Lactate +0.4 -0.2 -0.2 +0.7 -0.2
phage Bas09 +1.3 +0.3 -0.2 +0.3 -0.5
phage WM_Bas09 +0.6 +0.1 +0.0 -0.0 +0.7
no phage control Control_ECRC101_WM +0.5 +0.0 +0.1 +0.3 +1.9
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