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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
MCAODC_16540 and ompC2 are separated by 168 nucleotides
ompC2 and yddG are separated by 258 nucleotides
yddG and fdnG are separated by 288 nucleotides
fdnG and fdnH are separated by 12 nucleotides
MCAODC_16540: MCAODC_16540 - IpaH-like protein, at 203,252 to 203,755
_16540
MCAODC_16545: ompC2 - Outer membrane porin C 2, at 203,924 to 205,024
ompC2
MCAODC_16550: yddG - aromatic amino acid efflux DMT transporter YddG, at 205,283 to 206,107
yddG
MCAODC_16555: fdnG - formate dehydrogenase-N subunit alpha, at 206,396 to 209,443
fdnG
MCAODC_16560: fdnH - formate dehydrogenase N subunit beta, at 209,456 to 210,340
fdnH
Group
Condition
MCAODC
_16540
MCAODC
_16545
MCAODC
_16550
MCAODC
_16555
MCAODC
_16560
ompC2
yddG
fdnG
fdnH
phage
EV240
N.D.
-0.9
-0.6
+0.3
-1.0
carbon source
Sodium-DL-Lactate
N.D.
+0.2
-1.8
-0.2
-0.2
carbon source
L-Arabinose
N.D.
-0.6
-0.6
-0.1
-0.5
carbon source
L-Arabinose
N.D.
-0.9
-0.5
+0.0
-0.0
phage
WM_Bas09
N.D.
-0.1
-0.9
-0.1
-0.3
phage
Bas09
N.D.
-0.6
-1.0
+0.0
+0.2
carbon source
Casamino-acids
N.D.
+0.2
-0.7
+0.0
-0.5
carbon source
Casamino-acids
N.D.
-0.1
-0.2
-0.3
-0.3
phage
Bas09
N.D.
-0.4
+0.4
+0.2
-1.0
no phage control
Control_ECRC101_WM
N.D.
+0.3
-0.4
-0.2
-0.3
carbon source
Sodium-DL-Lactate
N.D.
+0.1
-0.8
+0.0
-0.0
phage
EV240
N.D.
-1.2
+1.0
-0.0
-0.3
phage
Bas14
N.D.
-0.3
-0.2
-0.2
+0.2
phage
WM_EV240
N.D.
+0.1
+0.4
-0.3
-0.7
phage
WM_Bas09
N.D.
+0.2
-0.4
-0.1
-0.2
phage
WM_TP9
N.D.
-0.2
-0.0
+0.1
-0.2
phage
WM_EV240
N.D.
-0.0
-0.2
-0.1
-0.0
phage
WM_Bas14
N.D.
-0.3
+0.3
-0.1
-0.1
carbon source
D-Glucose
N.D.
+0.3
-0.4
-0.2
+0.1
phage
WM_Bas41
N.D.
-0.1
+0.9
+0.1
-0.9
phage
WM_RB68
N.D.
+0.0
+0.6
-0.1
-0.3
no phage control
Control_ECRC101_WM
N.D.
-0.1
+0.5
-0.4
+0.2
phage
Bas14
N.D.
+0.0
+0.9
-0.2
-0.4
carbon source
D-Glucose
N.D.
+0.3
+0.2
+0.3
-0.4
phage
TP9
N.D.
-0.2
+0.6
+0.1
-0.0
phage
WM_TP9
N.D.
+0.3
+1.3
-0.0
+0.0
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