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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
espR1 and MCAODC_16535 are separated by 62 nucleotides
MCAODC_16535 and MCAODC_16540 are separated by 122 nucleotides
MCAODC_16540 and ompC2 are separated by 168 nucleotides
ompC2 and yddG are separated by 258 nucleotides
MCAODC_16530: espR1 - T3SS effector leucine-rich repeat protein EspR1, at 201,175 to 202,434
espR1
MCAODC_16535: MCAODC_16535 - leucine Rich Repeat family protein, at 202,497 to 203,129
_16535
MCAODC_16540: MCAODC_16540 - IpaH-like protein, at 203,252 to 203,755
_16540
MCAODC_16545: ompC2 - Outer membrane porin C 2, at 203,924 to 205,024
ompC2
MCAODC_16550: yddG - aromatic amino acid efflux DMT transporter YddG, at 205,283 to 206,107
yddG
Group
Condition
MCAODC
_16530
MCAODC
_16535
MCAODC
_16540
MCAODC
_16545
MCAODC
_16550
espR1
ompC2
yddG
phage
Bas09
-0.9
N.D.
N.D.
-0.6
-1.0
phage
EV240
-0.5
N.D.
N.D.
-0.9
-0.6
carbon source
L-Arabinose
-0.4
N.D.
N.D.
-0.9
-0.5
carbon source
Sodium-DL-Lactate
-0.1
N.D.
N.D.
+0.2
-1.8
carbon source
Sodium-DL-Lactate
-1.0
N.D.
N.D.
+0.1
-0.8
carbon source
L-Arabinose
-0.3
N.D.
N.D.
-0.6
-0.6
carbon source
Casamino-acids
-1.2
N.D.
N.D.
-0.1
-0.2
carbon source
Casamino-acids
-0.5
N.D.
N.D.
+0.2
-0.7
carbon source
D-Glucose
-0.4
N.D.
N.D.
+0.3
-0.4
phage
WM_Bas09
+0.5
N.D.
N.D.
-0.1
-0.9
no phage control
Control_ECRC101_WM
-0.0
N.D.
N.D.
+0.3
-0.4
phage
Bas14
+0.6
N.D.
N.D.
-0.3
-0.2
phage
WM_TP9
+0.4
N.D.
N.D.
-0.2
-0.0
carbon source
D-Glucose
-0.3
N.D.
N.D.
+0.3
+0.2
phage
Bas09
+0.2
N.D.
N.D.
-0.4
+0.4
phage
WM_RB68
-0.2
N.D.
N.D.
+0.0
+0.6
phage
WM_Bas41
-0.2
N.D.
N.D.
-0.1
+0.9
no phage control
Control_ECRC101_WM
+0.2
N.D.
N.D.
-0.1
+0.5
phage
Bas14
-0.3
N.D.
N.D.
+0.0
+0.9
phage
WM_EV240
+0.9
N.D.
N.D.
-0.0
-0.2
phage
WM_Bas14
+0.8
N.D.
N.D.
-0.3
+0.3
phage
WM_Bas09
+1.1
N.D.
N.D.
+0.2
-0.4
phage
EV240
+1.2
N.D.
N.D.
-1.2
+1.0
phage
TP9
+0.7
N.D.
N.D.
-0.2
+0.6
phage
WM_EV240
+0.8
N.D.
N.D.
+0.1
+0.4
phage
WM_TP9
+1.0
N.D.
N.D.
+0.3
+1.3
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