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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ynbB and ynbC are separated by 15 nucleotides
ynbC and ynbD overlap by 11 nucleotides
ynbD and azoR are separated by 50 nucleotides
azoR and hrpA are separated by 200 nucleotides
MCAODC_16185: ynbB - Uncharacterized protein YnbB, at 131,622 to 132,518
ynbB
MCAODC_16190: ynbC - Uncharacterized protein YnbC, at 132,534 to 134,291
ynbC
MCAODC_16195: ynbD - Uncharacterized protein YnbD, at 134,281 to 135,597
ynbD
MCAODC_16200: azoR - FMN-dependent NADH-azoreductase, at 135,648 to 136,253
azoR
MCAODC_16205: hrpA - ATP-dependent RNA helicase HrpA, at 136,454 to 140,356
hrpA
Group
Condition
MCAODC
_16185
MCAODC
_16190
MCAODC
_16195
MCAODC
_16200
MCAODC
_16205
ynbB
ynbC
ynbD
azoR
hrpA
carbon source
Casamino-acids
-3.6
+0.3
-0.2
-0.2
-0.3
phage
EV240
-2.7
+0.0
-0.5
-0.6
-0.0
phage
Bas14
-1.6
+0.2
-0.4
-0.2
-0.6
carbon source
D-Glucose
-0.7
-0.3
-0.1
-1.0
-0.0
phage
Bas09
-1.7
+0.3
-0.0
-0.4
-0.2
phage
WM_EV240
-1.0
-0.1
+0.1
+0.1
-0.9
no phage control
Control_ECRC101_WM
-0.7
+0.1
-0.1
-0.7
-0.1
carbon source
Casamino-acids
-1.3
+0.1
-0.1
+0.0
-0.1
phage
Bas14
-1.8
+0.3
+0.2
-0.2
+0.2
phage
WM_Bas41
-1.3
+0.0
-0.0
-0.0
-0.0
carbon source
D-Glucose
-1.0
-0.0
-0.2
+0.2
+0.2
phage
WM_TP9
-0.5
-0.1
+0.1
+0.2
-0.4
carbon source
L-Arabinose
+0.2
+0.1
-0.5
-0.2
-0.1
phage
Bas09
-0.1
-0.2
+0.0
+0.1
-0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.2
-0.0
-0.0
-0.1
phage
WM_Bas14
-0.0
-0.0
+0.1
-0.3
-0.0
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.2
-0.4
-0.0
phage
WM_Bas09
+0.0
-0.0
+0.1
-0.0
-0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.2
-0.2
+0.1
-0.0
phage
WM_TP9
-0.6
+0.1
+0.4
-0.2
+0.2
carbon source
L-Arabinose
+0.4
-0.2
-0.1
+0.1
-0.1
phage
TP9
-0.5
+0.0
-0.1
+0.2
+0.6
phage
WM_RB68
+0.6
+0.1
-0.2
-0.0
+0.0
phage
WM_EV240
+1.2
-0.3
-0.0
+0.3
+0.1
phage
EV240
+1.2
+0.0
-0.1
+0.0
+0.1
phage
WM_Bas09
+1.1
-0.1
+0.3
+0.3
-0.3
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