Fitness for 5 genes in Escherichia coli ECRC101

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500 ntdbpA and ttcA are separated by 128 nucleotidesttcA and uspF are separated by 175 nucleotidesuspF and MCAODC_16110 are separated by 140 nucleotidesMCAODC_16110 and MCAODC_16115 overlap by 26 nucleotides MCAODC_16095: dbpA - ATP-dependent RNA helicase DbpA, at 107,658 to 109,031 dbpA MCAODC_16100: ttcA - tRNA 2-thiocytidine(32) synthetase TtcA, at 109,160 to 110,095 ttcA MCAODC_16105: uspF - universal stress protein UspF, at 110,271 to 110,705 uspF MCAODC_16110: MCAODC_16110 - hypothetical protein, at 110,846 to 111,613 _16110 MCAODC_16115: MCAODC_16115 - Putative outer membrane protein, at 111,588 to 111,959 _16115
Group Condition MCAODC_16095 MCAODC_16100 MCAODC_16105 MCAODC_16110 MCAODC_16115
dbpA ttcA uspF
phage WM_Bas41 -0.6 -0.7 -1.6 -1.1 N.D.
no phage control Control_ECRC101_WM -0.5 -0.6 -0.1 -1.3 N.D.
phage WM_EV240 +0.3 +0.2 -1.2 -1.6 N.D.
phage WM_EV240 -0.6 +0.2 -0.4 -0.4 N.D.
carbon source Casamino-acids -0.1 -0.5 -1.2 +0.8 N.D.
phage WM_Bas14 -0.1 -0.1 -0.4 -0.4 N.D.
phage WM_RB68 -0.4 -0.3 -0.1 -0.1 N.D.
carbon source Casamino-acids -0.4 -0.1 -0.3 -0.0 N.D.
no phage control Control_ECRC101_WM -0.1 -0.7 +0.1 +0.1 N.D.
carbon source D-Glucose +0.1 -0.6 -0.0 +0.2 N.D.
phage WM_Bas09 -0.1 -0.6 -0.1 +0.5 N.D.
phage Bas14 +0.6 +0.5 +0.1 -1.5 N.D.
phage Bas09 -0.2 +0.1 -0.2 +0.3 N.D.
phage TP9 +0.3 +0.3 -0.1 -0.4 N.D.
phage EV240 +0.3 +0.5 +0.8 -1.4 N.D.
phage WM_TP9 -0.1 +0.1 +0.1 +0.1 N.D.
phage Bas14 +0.6 -0.1 +0.4 -0.6 N.D.
phage Bas09 +0.5 +0.1 +0.0 -0.3 N.D.
carbon source Sodium-DL-Lactate -0.0 +0.2 +0.0 +0.2 N.D.
phage WM_Bas09 +0.0 -0.5 +0.3 +0.7 N.D.
phage WM_TP9 +0.2 +0.0 +0.4 -0.0 N.D.
carbon source D-Glucose +0.1 +0.3 +0.4 -0.1 N.D.
phage EV240 +0.2 +0.3 +1.0 -0.7 N.D.
carbon source L-Arabinose +0.4 -0.1 +0.3 +0.5 N.D.
carbon source Sodium-DL-Lactate +0.1 -0.1 +0.7 +0.5 N.D.
carbon source L-Arabinose +0.3 +0.1 -0.2 +1.0 N.D.
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