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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ycjM and ycjN are separated by 13 nucleotides
ycjN and MCAODC_15900 are separated by 48 nucleotides
MCAODC_15900 and ugpA are separated by 20 nucleotides
ugpA and ycjP overlap by 14 nucleotides
MCAODC_15890: ycjM - Glucosylglycerate phosphorylase, at 68,394 to 69,698
ycjM
MCAODC_15895: ycjN - Putative ABC transporter periplasmic-binding protein YcjN, at 69,712 to 70,341
ycjN
MCAODC_15900: MCAODC_15900 - ABC transporter substrate-binding protein, at 70,390 to 71,004
_15900
MCAODC_15905: ugpA - sugar ABC transporter permease, at 71,025 to 71,906
ugpA
MCAODC_15910: ycjP - Inner membrane ABC transporter permease protein YcjP, at 71,893 to 72,735
ycjP
Group
Condition
MCAODC
_15890
MCAODC
_15895
MCAODC
_15900
MCAODC
_15905
MCAODC
_15910
ycjM
ycjN
ugpA
ycjP
phage
WM_EV240
-0.7
-2.8
-0.2
+0.2
-0.2
carbon source
L-Arabinose
-0.3
-2.2
+0.5
-0.0
+0.0
phage
EV240
-1.5
+0.6
-0.4
+0.2
-0.6
phage
WM_TP9
-0.2
-1.2
-0.1
+0.1
-0.1
carbon source
Casamino-acids
-0.0
-1.5
+0.3
+0.5
-0.6
no phage control
Control_ECRC101_WM
+0.3
-1.8
+0.3
-0.1
+0.2
carbon source
Sodium-DL-Lactate
-0.9
+0.2
-0.0
+0.3
-0.2
carbon source
D-Glucose
-1.0
+0.0
+0.4
-0.4
+0.3
carbon source
Casamino-acids
-0.7
+0.3
-0.0
+0.1
+0.1
phage
Bas14
+0.4
+0.1
+0.2
-0.2
-0.6
phage
EV240
+0.3
-0.9
+0.4
+0.2
+0.1
phage
WM_Bas09
+0.0
-1.1
+0.2
+0.5
+0.3
phage
WM_Bas09
+0.4
-0.5
+0.1
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.1
+0.0
+0.3
+0.1
phage
WM_TP9
+0.3
-0.6
+0.1
+0.2
+0.1
carbon source
L-Arabinose
-0.8
+0.9
+0.1
-0.1
+0.3
phage
WM_EV240
-0.8
-0.2
+0.3
+0.5
+0.6
phage
WM_Bas14
-0.1
+0.2
+0.2
+0.1
+0.0
phage
WM_Bas41
-0.1
+0.0
+0.1
+0.3
+0.2
phage
Bas09
+0.5
-0.3
+0.3
+0.1
+0.1
phage
Bas09
-0.1
+0.5
+0.4
+0.2
-0.1
phage
TP9
+0.2
+0.1
+0.1
-0.2
+0.6
carbon source
D-Glucose
-0.1
+0.1
+0.2
+0.4
+0.2
phage
Bas14
+0.5
+0.0
-0.1
+0.6
-0.1
no phage control
Control_ECRC101_WM
+0.1
+1.1
+0.2
+0.1
+0.0
phage
WM_RB68
+0.4
+0.6
+0.0
+0.6
+0.3
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