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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
sapB and sapA overlap by 4 nucleotides
sapA and MCAODC_15815 are separated by 312 nucleotides
MCAODC_15815 and puuP are separated by 133 nucleotides
puuP and puuA are separated by 302 nucleotides
MCAODC_15805: sapB - putrescine ABC transporter permease SapB, at 52,426 to 53,391
sapB
MCAODC_15810: sapA - peptide ABC transporter substrate-binding protein SapA, at 53,388 to 55,031
sapA
MCAODC_15815: MCAODC_15815 - DUF2543 domain-containing protein, at 55,344 to 55,589
_15815
MCAODC_15820: puuP - putrescine/proton symporter PuuP, at 55,723 to 57,108
puuP
MCAODC_15825: puuA - glutamate-putrescine ligase, at 57,411 to 58,829
puuA
Group
Condition
MCAODC
_15805
MCAODC
_15810
MCAODC
_15815
MCAODC
_15820
MCAODC
_15825
sapB
sapA
puuP
puuA
phage
WM_EV240
N.D.
N.D.
-1.7
-0.3
+0.2
carbon source
Casamino-acids
N.D.
N.D.
-0.7
-0.5
-0.2
phage
Bas09
N.D.
N.D.
-1.4
-0.1
+0.3
phage
WM_Bas41
N.D.
N.D.
-1.2
+0.2
-0.1
phage
WM_EV240
N.D.
N.D.
-0.9
-0.7
+0.4
phage
EV240
N.D.
N.D.
-0.7
-0.4
+0.2
phage
WM_TP9
N.D.
N.D.
-0.7
-0.1
+0.2
phage
WM_Bas09
N.D.
N.D.
-0.7
-0.1
+0.2
phage
WM_RB68
N.D.
N.D.
-0.6
+0.0
+0.0
phage
WM_TP9
N.D.
N.D.
-0.5
-0.1
+0.1
carbon source
Casamino-acids
N.D.
N.D.
-0.4
+0.0
-0.2
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.5
-0.0
+0.0
no phage control
Control_ECRC101_WM
N.D.
N.D.
-0.0
-0.2
-0.2
carbon source
L-Arabinose
N.D.
N.D.
-0.5
+0.0
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.1
-0.3
+0.0
carbon source
L-Arabinose
N.D.
N.D.
-0.4
-0.1
+0.2
phage
WM_Bas09
N.D.
N.D.
+0.1
-0.2
-0.1
carbon source
D-Glucose
N.D.
N.D.
-0.3
-0.0
+0.2
phage
WM_Bas14
N.D.
N.D.
-0.2
+0.0
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.2
-0.1
-0.0
carbon source
D-Glucose
N.D.
N.D.
+0.6
+0.1
-0.2
phage
EV240
N.D.
N.D.
+0.9
-0.2
+0.0
phage
Bas14
N.D.
N.D.
+0.7
-0.1
+0.3
phage
TP9
N.D.
N.D.
+0.7
+0.1
+0.2
phage
Bas09
N.D.
N.D.
+1.0
-0.0
+0.3
phage
Bas14
N.D.
N.D.
+1.6
-0.0
+0.2
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