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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
pgpB and lapA are separated by 148 nucleotides
lapA and lapB are separated by 6 nucleotides
lapB and pyrF are separated by 132 nucleotides
pyrF and yciH overlap by 1 nucleotides
MCAODC_15700: pgpB - phosphatidylglycerophosphatase B, at 30,024 to 30,788
pgpB
MCAODC_15705: lapA - lipopolysaccharide assembly protein LapA, at 30,937 to 31,245
lapA
MCAODC_15710: lapB - lipopolysaccharide assembly protein LapB, at 31,252 to 32,421
lapB
MCAODC_15715: pyrF - orotidine-5'-phosphate decarboxylase, at 32,554 to 33,351
pyrF
MCAODC_15720: yciH - stress response translation initiation inhibitor YciH, at 33,351 to 33,677
yciH
Group
Condition
MCAODC
_15700
MCAODC
_15705
MCAODC
_15710
MCAODC
_15715
MCAODC
_15720
pgpB
lapA
lapB
pyrF
yciH
phage
WM_Bas41
-0.0
-0.7
N.D.
-2.7
-4.1
carbon source
L-Arabinose
+0.2
+0.1
N.D.
-2.6
-4.6
carbon source
L-Arabinose
+0.2
-0.1
N.D.
-5.8
-0.4
carbon source
Sodium-DL-Lactate
-0.0
-0.6
N.D.
-5.8
+0.6
carbon source
D-Glucose
+0.6
+0.1
N.D.
-5.8
-0.5
carbon source
Sodium-DL-Lactate
+0.2
-0.9
N.D.
-5.8
+1.2
carbon source
D-Glucose
+0.7
-0.7
N.D.
-5.7
+1.4
phage
EV240
-0.2
-1.6
N.D.
-0.0
-1.9
phage
EV240
-0.3
-1.3
N.D.
-0.4
-1.3
phage
Bas09
+0.1
-1.5
N.D.
-0.4
-1.2
carbon source
Casamino-acids
+0.0
-0.8
N.D.
-2.1
-0.1
phage
WM_EV240
+0.0
-0.5
N.D.
-0.5
-1.2
phage
Bas09
-0.1
+0.3
N.D.
-1.2
-1.1
phage
WM_Bas14
-0.2
-0.7
N.D.
-1.0
+0.1
phage
WM_EV240
+0.2
-0.6
N.D.
-0.6
-0.5
carbon source
Casamino-acids
+0.6
+0.6
N.D.
-3.6
+1.2
phage
Bas14
-0.3
+0.2
N.D.
+0.4
-1.2
phage
WM_Bas09
-0.2
-0.8
N.D.
-0.1
+0.5
phage
WM_Bas09
+0.3
-0.1
N.D.
-0.9
+0.2
phage
Bas14
+0.2
+0.3
N.D.
-0.0
-1.0
no phage control
Control_ECRC101_WM
+0.2
-0.5
N.D.
+0.3
-0.2
phage
WM_TP9
-0.3
-0.4
N.D.
-0.3
+0.7
phage
WM_RB68
+0.6
-0.2
N.D.
-0.4
-0.2
no phage control
Control_ECRC101_WM
-0.1
-0.2
N.D.
-0.0
+0.3
phage
WM_TP9
+0.2
-0.3
N.D.
-0.4
+0.8
phage
TP9
+0.3
+0.3
N.D.
+0.5
-0.6
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