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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ymiC and acnA are separated by 163 nucleotides
acnA and ribA are separated by 63 nucleotides
ribA and pgpB are separated by 169 nucleotides
pgpB and lapA are separated by 148 nucleotides
MCAODC_15685: ymiC - Protein YmiC, at 26,281 to 26,361
ymiC
MCAODC_15690: acnA - aconitate hydratase AcnA, at 26,525 to 29,200
acnA
MCAODC_15695: ribA - GTP cyclohydrolase-2, at 29,264 to 29,854
ribA
MCAODC_15700: pgpB - phosphatidylglycerophosphatase B, at 30,024 to 30,788
pgpB
MCAODC_15705: lapA - lipopolysaccharide assembly protein LapA, at 30,937 to 31,245
lapA
Group
Condition
MCAODC
_15685
MCAODC
_15690
MCAODC
_15695
MCAODC
_15700
MCAODC
_15705
ymiC
acnA
ribA
pgpB
lapA
phage
EV240
N.D.
-1.0
N.D.
-0.2
-1.6
phage
EV240
N.D.
-0.0
N.D.
-0.3
-1.3
phage
Bas09
N.D.
-0.0
N.D.
+0.1
-1.5
phage
WM_EV240
N.D.
-0.7
N.D.
+0.0
-0.5
phage
WM_Bas09
N.D.
-0.1
N.D.
-0.2
-0.8
phage
WM_TP9
N.D.
-0.3
N.D.
-0.3
-0.4
phage
WM_Bas14
N.D.
-0.1
N.D.
-0.2
-0.7
carbon source
Sodium-DL-Lactate
N.D.
-0.2
N.D.
+0.2
-0.9
phage
WM_Bas41
N.D.
+0.1
N.D.
-0.0
-0.7
no phage control
Control_ECRC101_WM
N.D.
-0.2
N.D.
-0.1
-0.2
no phage control
Control_ECRC101_WM
N.D.
-0.2
N.D.
+0.2
-0.5
carbon source
Casamino-acids
N.D.
+0.3
N.D.
+0.0
-0.8
phage
WM_EV240
N.D.
-0.1
N.D.
+0.2
-0.6
carbon source
Sodium-DL-Lactate
N.D.
+0.3
N.D.
-0.0
-0.6
phage
WM_TP9
N.D.
+0.0
N.D.
+0.2
-0.3
phage
Bas09
N.D.
-0.2
N.D.
-0.1
+0.3
phage
WM_Bas09
N.D.
-0.2
N.D.
+0.3
-0.1
carbon source
D-Glucose
N.D.
+0.2
N.D.
+0.7
-0.7
phage
WM_RB68
N.D.
-0.2
N.D.
+0.6
-0.2
phage
Bas14
N.D.
+0.3
N.D.
-0.3
+0.2
carbon source
L-Arabinose
N.D.
+0.2
N.D.
+0.2
-0.1
phage
TP9
N.D.
-0.3
N.D.
+0.3
+0.3
phage
Bas14
N.D.
-0.2
N.D.
+0.2
+0.3
carbon source
L-Arabinose
N.D.
+0.2
N.D.
+0.2
+0.1
carbon source
D-Glucose
N.D.
+0.1
N.D.
+0.6
+0.1
carbon source
Casamino-acids
N.D.
-0.1
N.D.
+0.6
+0.6
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