Fitness for 5 genes in Escherichia coli ECRC101

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500 nttrpD and trpE overlap by 1 nucleotidestrpE and trpL are separated by 91 nucleotidestrpL and yciV are separated by 137 nucleotidesyciV and yciO overlap by 4 nucleotides MCAODC_15605: trpD - bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD, at 10,796 to 12,391 trpD MCAODC_15610: trpE - anthranilate synthase component I, at 12,391 to 13,953 trpE MCAODC_15615: trpL - trp operon leader peptide, at 14,045 to 14,089 trpL MCAODC_15620: yciV - 5'-3' exoribonuclease, at 14,227 to 15,108 yciV MCAODC_15625: yciO - L-threonylcarbamoyladenylate synthase, at 15,105 to 15,725 yciO
Group Condition MCAODC_15605 MCAODC_15610 MCAODC_15615 MCAODC_15620 MCAODC_15625
trpD trpE trpL yciV yciO
carbon source Sodium-DL-Lactate -4.9 -5.2 N.D. +0.1 +0.5
carbon source D-Glucose -4.1 -4.6 N.D. +0.1 -0.4
carbon source Sodium-DL-Lactate -5.3 -4.1 N.D. +0.1 +1.0
carbon source L-Arabinose -5.7 -3.5 N.D. +0.4 +0.4
carbon source D-Glucose -4.6 -4.1 N.D. +0.1 +0.7
carbon source L-Arabinose -4.4 -2.4 N.D. +0.2 -0.1
carbon source Casamino-acids -2.4 -2.7 N.D. +0.2 -1.3
carbon source Casamino-acids -2.7 -2.4 N.D. +0.2 -0.4
no phage control Control_ECRC101_WM -1.6 -1.8 N.D. -0.2 -0.8
no phage control Control_ECRC101_WM -2.2 -1.4 N.D. +0.4 -0.2
phage WM_Bas09 -0.9 -1.3 N.D. +0.1 +0.0
phage WM_Bas09 -0.8 -1.0 N.D. -0.2 +0.3
phage WM_TP9 -0.6 -0.5 N.D. +0.1 -0.4
phage Bas14 -0.2 -0.1 N.D. +0.4 -1.4
phage EV240 -0.0 -0.6 N.D. +0.1 -0.6
phage TP9 +0.0 -0.1 N.D. +0.3 -1.3
phage WM_Bas14 -0.4 -0.5 N.D. -0.0 -0.1
phage EV240 +0.0 -0.4 N.D. +0.2 -0.6
phage Bas09 -0.3 +0.1 N.D. +0.3 -0.7
phage WM_Bas41 -0.2 -0.3 N.D. -0.3 +0.2
phage WM_EV240 -0.4 +0.0 N.D. -0.2 +0.2
phage WM_TP9 -0.1 -0.0 N.D. -0.2 +0.1
phage Bas09 -0.1 -0.2 N.D. +0.1 +0.1
phage Bas14 -0.2 +0.2 N.D. +0.5 -0.4
phage WM_EV240 -0.4 +0.0 N.D. -0.1 +0.7
phage WM_RB68 +0.3 +0.4 N.D. +0.1 -0.1
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