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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
trpD and trpE overlap by 1 nucleotides
trpE and trpL are separated by 91 nucleotides
trpL and yciV are separated by 137 nucleotides
yciV and yciO overlap by 4 nucleotides
MCAODC_15605: trpD - bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD, at 10,796 to 12,391
trpD
MCAODC_15610: trpE - anthranilate synthase component I, at 12,391 to 13,953
trpE
MCAODC_15615: trpL - trp operon leader peptide, at 14,045 to 14,089
trpL
MCAODC_15620: yciV - 5'-3' exoribonuclease, at 14,227 to 15,108
yciV
MCAODC_15625: yciO - L-threonylcarbamoyladenylate synthase, at 15,105 to 15,725
yciO
Group
Condition
MCAODC
_15605
MCAODC
_15610
MCAODC
_15615
MCAODC
_15620
MCAODC
_15625
trpD
trpE
trpL
yciV
yciO
carbon source
Sodium-DL-Lactate
-4.9
-5.2
N.D.
+0.1
+0.5
carbon source
D-Glucose
-4.1
-4.6
N.D.
+0.1
-0.4
carbon source
Sodium-DL-Lactate
-5.3
-4.1
N.D.
+0.1
+1.0
carbon source
L-Arabinose
-5.7
-3.5
N.D.
+0.4
+0.4
carbon source
D-Glucose
-4.6
-4.1
N.D.
+0.1
+0.7
carbon source
L-Arabinose
-4.4
-2.4
N.D.
+0.2
-0.1
carbon source
Casamino-acids
-2.4
-2.7
N.D.
+0.2
-1.3
carbon source
Casamino-acids
-2.7
-2.4
N.D.
+0.2
-0.4
no phage control
Control_ECRC101_WM
-1.6
-1.8
N.D.
-0.2
-0.8
no phage control
Control_ECRC101_WM
-2.2
-1.4
N.D.
+0.4
-0.2
phage
WM_Bas09
-0.9
-1.3
N.D.
+0.1
+0.0
phage
WM_Bas09
-0.8
-1.0
N.D.
-0.2
+0.3
phage
WM_TP9
-0.6
-0.5
N.D.
+0.1
-0.4
phage
Bas14
-0.2
-0.1
N.D.
+0.4
-1.4
phage
EV240
-0.0
-0.6
N.D.
+0.1
-0.6
phage
TP9
+0.0
-0.1
N.D.
+0.3
-1.3
phage
WM_Bas14
-0.4
-0.5
N.D.
-0.0
-0.1
phage
EV240
+0.0
-0.4
N.D.
+0.2
-0.6
phage
Bas09
-0.3
+0.1
N.D.
+0.3
-0.7
phage
WM_Bas41
-0.2
-0.3
N.D.
-0.3
+0.2
phage
WM_EV240
-0.4
+0.0
N.D.
-0.2
+0.2
phage
WM_TP9
-0.1
-0.0
N.D.
-0.2
+0.1
phage
Bas09
-0.1
-0.2
N.D.
+0.1
+0.1
phage
Bas14
-0.2
+0.2
N.D.
+0.5
-0.4
phage
WM_EV240
-0.4
+0.0
N.D.
-0.1
+0.7
phage
WM_RB68
+0.3
+0.4
N.D.
+0.1
-0.1
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