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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
gspK and gspL are separated by 113 nucleotides
gspL and pulM overlap by 14 nucleotides
pulM and pulO are separated by 57 nucleotides
pulO and eptO are separated by 94 nucleotides
MCAODC_15300: gspK - type II secretion system minor pseudopilin GspK, at 46,240 to 47,217
gspK
MCAODC_15305: gspL - type II secretion system protein GspL, at 47,331 to 48,428
gspL
MCAODC_15310: pulM - type II secretion system protein M, at 48,415 to 48,927
pulM
MCAODC_15315: pulO - prepilin peptidase, at 48,985 to 49,818
pulO
MCAODC_15320: eptO - GspS family T2SS pilot lipoprotein variant EptO, at 49,913 to 50,311
eptO
Group
Condition
MCAODC
_15300
MCAODC
_15305
MCAODC
_15310
MCAODC
_15315
MCAODC
_15320
gspK
gspL
pulM
pulO
eptO
phage
WM_EV240
+0.0
-0.3
-0.3
-0.2
+0.1
carbon source
L-Arabinose
+0.0
-0.2
-0.2
-0.1
-0.0
carbon source
Casamino-acids
-0.2
-0.2
-0.1
-0.0
+0.1
carbon source
D-Glucose
-0.1
+0.1
-0.1
-0.1
+0.1
phage
WM_RB68
+0.0
-0.2
+0.0
-0.1
+0.0
phage
WM_Bas14
-0.1
+0.1
-0.3
-0.0
+0.2
phage
Bas09
+0.2
-0.0
-0.0
-0.2
-0.0
phage
WM_TP9
+0.0
-0.0
-0.0
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.0
+0.1
-0.0
-0.1
-0.1
phage
WM_Bas09
-0.1
-0.0
+0.0
+0.0
+0.1
phage
EV240
+0.1
-0.1
-0.1
-0.1
+0.1
no phage control
Control_ECRC101_WM
-0.1
-0.0
+0.0
+0.2
-0.0
carbon source
Sodium-DL-Lactate
-0.1
-0.0
+0.0
+0.1
-0.0
phage
EV240
-0.0
+0.0
-0.2
+0.1
+0.1
phage
WM_Bas09
-0.2
+0.0
-0.1
+0.3
-0.0
carbon source
L-Arabinose
-0.0
+0.0
-0.2
+0.2
+0.1
phage
WM_EV240
-0.1
+0.1
+0.0
-0.0
+0.1
phage
WM_TP9
+0.1
+0.0
+0.2
-0.0
-0.2
phage
Bas14
+0.0
+0.2
-0.1
-0.3
+0.3
phage
WM_Bas41
-0.0
-0.4
+0.2
+0.0
+0.4
no phage control
Control_ECRC101_WM
+0.0
+0.3
-0.0
-0.0
+0.0
phage
Bas09
-0.0
-0.0
+0.0
+0.1
+0.1
phage
TP9
+0.1
+0.0
+0.1
+0.0
+0.1
carbon source
D-Glucose
-0.0
-0.0
+0.0
+0.3
+0.1
carbon source
Casamino-acids
-0.0
+0.3
+0.1
-0.4
+0.5
phage
Bas14
+0.0
+0.1
+0.1
+0.0
+0.2
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