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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_15025 and MCAODC_15030 overlap by 8 nucleotides
MCAODC_15030 and MCAODC_15035 are separated by 2 nucleotides
MCAODC_15035 and MCAODC_15040 are separated by 12 nucleotides
MCAODC_15040 and yjdB are separated by 7 nucleotides
MCAODC_15025: MCAODC_15025 - recombinase RecA, at 2,937,155 to 2,937,481
_15025
MCAODC_15030: MCAODC_15030 - DNA breaking-rejoining protein, at 2,937,474 to 2,937,755
_15030
MCAODC_15035: MCAODC_15035 - phage tail protein, at 2,937,758 to 2,938,381
_15035
MCAODC_15040: MCAODC_15040 - phage tail protein, at 2,938,394 to 2,938,792
_15040
MCAODC_15045: yjdB - phage tail protein, at 2,938,800 to 2,939,552
yjdB
Group
Condition
MCAODC
_15025
MCAODC
_15030
MCAODC
_15035
MCAODC
_15040
MCAODC
_15045
yjdB
phage
WM_EV240
-2.6
-0.8
-0.3
-0.0
N.D.
phage
Bas14
-1.9
-0.2
-0.3
+0.2
N.D.
phage
WM_Bas41
-1.5
+0.0
-0.2
+0.4
N.D.
phage
EV240
-0.6
-0.8
-0.1
+0.2
N.D.
carbon source
D-Glucose
-0.9
-0.4
+0.1
+0.4
N.D.
phage
WM_Bas09
-0.5
-0.0
+0.0
-0.1
N.D.
phage
WM_TP9
-0.1
-0.0
-0.4
+0.0
N.D.
phage
TP9
-1.0
+0.6
-0.2
+0.2
N.D.
no phage control
Control_ECRC101_WM
-0.5
+0.0
+0.1
+0.1
N.D.
carbon source
Casamino-acids
-0.4
+0.3
+0.1
-0.1
N.D.
carbon source
Casamino-acids
-0.1
+0.4
-0.0
-0.3
N.D.
carbon source
Sodium-DL-Lactate
-0.0
-0.2
+0.2
+0.0
N.D.
carbon source
Sodium-DL-Lactate
+0.2
-0.4
+0.2
+0.1
N.D.
phage
Bas09
-0.1
+0.4
-0.1
-0.0
N.D.
carbon source
D-Glucose
+0.5
-0.4
+0.2
-0.1
N.D.
carbon source
L-Arabinose
-0.3
-0.6
+0.6
+0.5
N.D.
phage
Bas09
+0.3
+0.1
-0.2
+0.0
N.D.
phage
WM_TP9
+0.8
-0.0
-0.4
-0.0
N.D.
carbon source
L-Arabinose
-0.6
+0.5
+0.5
+0.1
N.D.
phage
WM_Bas14
-0.1
+0.4
+0.2
+0.1
N.D.
no phage control
Control_ECRC101_WM
-0.3
+0.7
+0.2
+0.1
N.D.
phage
WM_EV240
+0.9
+0.2
-0.4
-0.0
N.D.
phage
EV240
+0.6
+0.5
+0.6
-0.9
N.D.
phage
WM_Bas09
+0.3
+0.7
-0.0
+0.1
N.D.
phage
WM_RB68
+0.1
+0.5
+0.3
+0.4
N.D.
phage
Bas14
+0.7
+0.6
-0.1
+0.1
N.D.
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