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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yohF and yohD are separated by 129 nucleotides
yohD and yohC are separated by 169 nucleotides
yohC and pbpG are separated by 173 nucleotides
pbpG and dld are separated by 37 nucleotides
MCAODC_14680: yohF - SDR family oxidoreductase, at 2,891,536 to 2,892,297
yohF
MCAODC_14685: yohD - Inner membrane protein YohD, at 2,892,427 to 2,893,005
yohD
MCAODC_14690: yohC - Inner membrane protein YohC, at 2,893,175 to 2,893,762
yohC
MCAODC_14695: pbpG - D-alanyl-D-alanine endopeptidase, at 2,893,936 to 2,894,868
pbpG
MCAODC_14700: dld - D-lactate dehydrogenase, at 2,894,906 to 2,896,621
dld
Group
Condition
MCAODC
_14680
MCAODC
_14685
MCAODC
_14690
MCAODC
_14695
MCAODC
_14700
yohF
yohD
yohC
pbpG
dld
phage
WM_EV240
-0.3
-0.8
-0.0
-0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.2
-0.6
+0.2
-0.3
phage
WM_EV240
-0.5
-0.4
-0.0
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.1
-0.3
-0.2
+0.2
-0.6
phage
WM_Bas09
-0.3
-0.4
+0.1
+0.1
+0.0
phage
TP9
-0.2
+0.3
-0.6
+0.1
-0.0
phage
WM_TP9
-0.2
-0.1
-0.2
+0.2
-0.1
phage
WM_Bas09
-0.1
-0.3
+0.0
-0.1
+0.1
carbon source
D-Glucose
-0.3
+0.4
-0.3
+0.1
-0.2
carbon source
L-Arabinose
+0.0
+0.1
-0.2
+0.0
+0.1
carbon source
Casamino-acids
-0.2
-0.1
+0.1
+0.1
+0.1
phage
Bas09
+0.1
-0.1
-0.2
+0.2
+0.0
carbon source
D-Glucose
-0.0
-0.3
+0.1
+0.2
+0.1
phage
EV240
-0.2
+0.3
-0.3
+0.3
-0.0
phage
WM_RB68
+0.0
+0.0
+0.0
+0.0
-0.1
carbon source
L-Arabinose
-0.1
+0.2
+0.1
-0.0
-0.1
phage
Bas14
+0.2
+0.2
-0.4
+0.1
+0.1
phage
Bas09
-0.1
+0.1
+0.3
-0.2
+0.1
phage
WM_TP9
+0.1
-0.3
+0.3
+0.1
-0.1
no phage control
Control_ECRC101_WM
-0.1
-0.1
+0.3
-0.0
+0.1
carbon source
Casamino-acids
-0.1
-0.0
-0.1
+0.3
+0.2
phage
WM_Bas41
+0.1
+0.0
+0.1
+0.1
-0.1
phage
EV240
-0.0
+0.3
-0.2
-0.0
+0.3
phage
Bas14
-0.5
+0.7
+0.4
+0.2
-0.1
phage
WM_Bas14
+0.2
+0.2
+0.2
+0.1
-0.1
no phage control
Control_ECRC101_WM
+0.1
+0.2
+0.4
+0.3
-0.1
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