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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
uhpC and gtdA are separated by 11 nucleotides
gtdA and ycgM are separated by 14 nucleotides
ycgM and maiA are separated by 8 nucleotides
maiA and ubiH are separated by 14 nucleotides
MCAODC_14640: uhpC - aromatic acid/H+ symport family MFS transporter, at 2,883,268 to 2,884,626
uhpC
MCAODC_14645: gtdA - gentisate 1,2-dioxygenase, at 2,884,638 to 2,885,666
gtdA
MCAODC_14650: ycgM - 5-carboxymethyl-2-hydroxymuconate isomerase, at 2,885,681 to 2,886,382
ycgM
MCAODC_14655: maiA - maleylacetoacetate isomerase, at 2,886,391 to 2,887,035
maiA
MCAODC_14660: ubiH - 3-hydroxybenzoate 6-monooxygenase, at 2,887,050 to 2,888,243
ubiH
Group
Condition
MCAODC
_14640
MCAODC
_14645
MCAODC
_14650
MCAODC
_14655
MCAODC
_14660
uhpC
gtdA
ycgM
maiA
ubiH
phage
WM_Bas41
+0.2
-0.1
-0.1
-1.6
+0.1
phage
WM_EV240
+0.0
-0.2
-0.3
-0.6
-0.1
phage
EV240
-0.0
-0.0
-0.3
-0.7
+0.1
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.4
-0.3
+0.1
phage
WM_Bas09
+0.0
+0.1
-0.1
-0.8
+0.1
phage
WM_RB68
+0.0
+0.2
-0.0
-0.5
-0.0
phage
Bas09
-0.2
-0.1
-0.2
+0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.3
+0.0
-0.9
+0.3
phage
TP9
-0.2
-0.0
-0.6
+0.2
+0.3
carbon source
L-Arabinose
-0.0
+0.0
-0.2
-0.2
+0.2
carbon source
D-Glucose
-0.1
-0.1
+0.1
-0.2
+0.2
phage
EV240
-0.1
-0.3
+0.4
-0.2
+0.2
no phage control
Control_ECRC101_WM
+0.0
-0.1
+0.1
-0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.3
-0.1
-0.0
-0.4
+0.2
carbon source
Casamino-acids
-0.1
-0.3
+0.4
-0.1
+0.2
phage
WM_Bas09
+0.1
-0.1
+0.4
-0.1
-0.1
phage
WM_Bas14
+0.2
+0.1
-0.0
-0.1
+0.2
phage
Bas14
-0.0
-0.0
+0.1
+0.2
+0.1
carbon source
D-Glucose
+0.4
-0.2
-0.0
-0.2
+0.3
phage
WM_TP9
-0.0
+0.0
+0.3
+0.2
-0.0
phage
WM_EV240
+0.2
-0.1
-0.3
+0.7
+0.1
carbon source
L-Arabinose
+0.3
+0.0
+0.0
-0.1
+0.3
carbon source
Casamino-acids
+0.2
+0.1
+0.1
-0.0
+0.3
phage
WM_TP9
-0.0
+0.1
+0.2
+0.4
+0.2
phage
Bas09
+0.0
+0.1
+0.2
+0.4
+0.2
phage
Bas14
+0.1
+0.2
-0.3
+1.2
+0.0
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