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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
preA and preT overlap by 7 nucleotides
preT and yeiS are separated by 193 nucleotides
yeiS and sanA are separated by 2 nucleotides
sanA and cdd are separated by 149 nucleotides
MCAODC_14600: preA - NAD-dependent dihydropyrimidine dehydrogenase subunit PreA, at 2,876,226 to 2,877,461
preA
MCAODC_14605: preT - NAD-dependent dihydropyrimidine dehydrogenase subunit PreT, at 2,877,455 to 2,878,693
preT
MCAODC_14610: yeiS - Uncharacterized protein YeiS, at 2,878,887 to 2,879,126
yeiS
MCAODC_14615: sanA - outer membrane permeability protein SanA, at 2,879,129 to 2,879,848
sanA
MCAODC_14620: cdd - cytidine deaminase, at 2,879,998 to 2,880,882
cdd
Group
Condition
MCAODC
_14600
MCAODC
_14605
MCAODC
_14610
MCAODC
_14615
MCAODC
_14620
preA
preT
yeiS
sanA
cdd
phage
WM_Bas41
-0.1
+0.1
-0.9
-0.3
-0.2
carbon source
Sodium-DL-Lactate
-0.0
-0.0
+0.1
-1.1
-0.4
phage
WM_Bas09
-0.2
-0.0
+0.2
-0.7
-0.2
carbon source
D-Glucose
+0.0
-0.5
+0.1
-0.8
+0.1
phage
WM_TP9
-0.2
+0.1
-0.2
-0.3
-0.1
phage
WM_EV240
-0.0
+0.1
-0.5
+0.3
-0.5
phage
WM_Bas14
-0.1
+0.0
-0.1
-0.1
-0.4
phage
WM_EV240
-0.2
-0.2
-0.5
+0.3
+0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.2
-0.7
+0.4
phage
Bas09
-0.4
+0.0
-0.1
+0.1
-0.0
phage
WM_TP9
-0.0
+0.0
-0.2
-0.1
+0.1
carbon source
Casamino-acids
+0.4
-0.3
+0.7
-1.0
+0.1
phage
Bas09
-0.2
-0.0
+0.3
-0.3
+0.2
phage
WM_RB68
-0.0
+0.1
-0.3
+0.3
-0.0
phage
Bas14
-0.6
+0.4
-0.1
+0.3
+0.0
no phage control
Control_ECRC101_WM
+0.1
+0.2
-0.2
+0.1
-0.1
phage
TP9
-0.1
-0.2
+0.2
-0.3
+0.5
carbon source
L-Arabinose
+0.2
+0.0
-0.3
-0.1
+0.4
carbon source
D-Glucose
+0.1
-0.1
+0.6
-0.5
+0.2
phage
EV240
-0.4
-0.1
+0.7
-0.1
+0.1
phage
WM_Bas09
+0.0
+0.1
-0.2
+0.4
+0.1
carbon source
L-Arabinose
+0.2
-0.2
+0.4
-0.3
+0.2
phage
EV240
+0.1
+0.2
-0.1
-0.5
+0.7
phage
Bas14
+0.0
+0.1
+0.0
+0.1
+0.3
no phage control
Control_ECRC101_WM
+0.0
+0.3
+0.3
-0.2
+0.1
carbon source
Casamino-acids
+0.4
+0.2
+0.4
+0.1
+0.2
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