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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
fruA and psuK are separated by 423 nucleotides
psuK and psuG overlap by 13 nucleotides
psuG and psuT are separated by 93 nucleotides
psuT and yeiL are separated by 70 nucleotides
MCAODC_14495: fruA - PTS fructose transporter subunit IIBC, at 2,851,381 to 2,853,072
fruA
MCAODC_14500: psuK - pseudouridine kinase, at 2,853,496 to 2,854,437
psuK
MCAODC_14505: psuG - pseudouridine-5'-phosphate glycosidase, at 2,854,425 to 2,855,363
psuG
MCAODC_14510: psuT - Putative pseudouridine transporter, at 2,855,457 to 2,856,707
psuT
MCAODC_14515: yeiL - Regulatory protein YeiL, at 2,856,778 to 2,857,476
yeiL
Group
Condition
MCAODC
_14495
MCAODC
_14500
MCAODC
_14505
MCAODC
_14510
MCAODC
_14515
fruA
psuK
psuG
psuT
yeiL
phage
Bas09
-0.1
-0.7
-0.3
+0.1
-2.1
carbon source
L-Arabinose
+0.1
-0.2
-1.5
-0.1
-1.2
phage
WM_Bas41
+0.1
-0.7
+0.2
-0.1
-1.9
phage
Bas14
+0.0
-0.5
-0.9
-0.1
-0.7
phage
WM_TP9
-0.1
-0.1
-0.4
+0.1
-1.1
phage
Bas14
-0.3
-0.7
-0.5
-0.2
+0.1
phage
EV240
+0.7
-0.3
+0.3
-0.7
-1.3
phage
WM_EV240
-0.5
-0.7
-0.7
-0.0
+0.6
phage
EV240
+1.0
-0.1
+0.0
-0.0
-2.1
phage
WM_Bas09
+0.0
-0.3
-0.2
+0.2
-0.9
carbon source
Sodium-DL-Lactate
+0.2
-0.6
-0.3
+0.1
-0.6
phage
WM_EV240
-0.4
+0.1
-0.3
-0.5
+0.2
phage
WM_Bas09
-0.2
-0.0
-0.6
+0.3
-0.1
carbon source
D-Glucose
-0.0
+0.2
-0.3
-0.2
-0.2
phage
WM_RB68
-0.1
-0.3
+0.3
+0.0
-0.3
phage
WM_TP9
-0.0
-0.4
+0.6
-0.3
-0.2
phage
TP9
+0.1
-0.1
+0.2
-0.1
-0.4
phage
Bas09
-0.3
-0.1
-0.2
+0.1
+0.5
carbon source
L-Arabinose
+0.0
+0.2
+0.1
-0.2
-0.1
carbon source
Casamino-acids
-0.2
-0.2
+0.4
-0.3
+0.4
no phage control
Control_ECRC101_WM
-0.2
-0.1
+0.2
+0.7
-0.4
carbon source
Casamino-acids
+0.1
+0.0
+0.2
-0.0
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.1
+0.3
+0.1
carbon source
D-Glucose
+0.1
+0.4
+0.7
+0.2
-0.4
carbon source
Sodium-DL-Lactate
+0.3
+0.1
+0.6
-0.1
+0.2
phage
WM_Bas14
+0.1
-0.1
+0.6
+0.3
+0.8
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