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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ccmF and dsbE overlap by 4 nucleotides
dsbE and ccmH overlap by 4 nucleotides
ccmH and narP are separated by 34 nucleotides
narP and yejO are separated by 319 nucleotides
MCAODC_14355: ccmF - cytochrome c-type biogenesis heme lyase CcmF, at 2,819,263 to 2,821,206
ccmF
MCAODC_14360: dsbE - thiol:disulfide interchange protein DsbE, at 2,821,203 to 2,821,760
dsbE
MCAODC_14365: ccmH - cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH, at 2,821,757 to 2,822,809
ccmH
MCAODC_14370: narP - nitrate/nitrite response regulator protein NarP, at 2,822,844 to 2,823,491
narP
MCAODC_14375: yejO - autotransporter YejO, at 2,823,811 to 2,826,402
yejO
Group
Condition
MCAODC
_14355
MCAODC
_14360
MCAODC
_14365
MCAODC
_14370
MCAODC
_14375
ccmF
dsbE
ccmH
narP
yejO
phage
WM_Bas41
-0.1
-0.3
-0.2
-0.1
-0.3
phage
WM_RB68
-0.1
-0.2
+0.1
+0.1
-0.3
phage
Bas14
-0.1
+0.1
+0.1
-0.6
+0.1
carbon source
Casamino-acids
+0.2
-0.1
+0.3
-0.5
-0.2
carbon source
Sodium-DL-Lactate
-0.1
-0.4
+0.1
-0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.0
+0.0
-0.2
-0.0
carbon source
Casamino-acids
+0.1
-0.2
+0.0
-0.1
+0.1
phage
WM_Bas09
-0.0
+0.2
-0.2
+0.1
-0.0
phage
WM_Bas14
-0.0
-0.1
+0.1
+0.1
-0.0
phage
EV240
-0.0
-0.0
-0.0
+0.2
+0.0
no phage control
Control_ECRC101_WM
-0.0
-0.2
-0.0
+0.3
+0.1
phage
WM_EV240
+0.0
+0.0
-0.3
+0.5
-0.1
phage
Bas09
-0.1
+0.0
+0.1
+0.1
-0.0
no phage control
Control_ECRC101_WM
-0.0
+0.1
+0.1
+0.0
-0.1
phage
WM_EV240
-0.2
+0.2
+0.1
+0.2
-0.1
carbon source
D-Glucose
-0.0
-0.2
+0.2
+0.1
+0.2
carbon source
D-Glucose
-0.0
+0.4
-0.1
-0.0
+0.0
phage
EV240
+0.0
+0.1
+0.0
+0.1
+0.1
phage
Bas09
+0.0
-0.1
+0.1
+0.3
-0.0
phage
WM_TP9
+0.1
+0.3
-0.1
+0.3
-0.2
phage
WM_TP9
-0.1
+0.2
+0.3
+0.4
-0.1
phage
WM_Bas09
-0.0
+0.4
+0.2
+0.4
-0.3
phage
TP9
-0.0
-0.1
+0.1
+0.7
-0.1
phage
Bas14
-0.1
+0.4
+0.0
+0.3
+0.0
carbon source
L-Arabinose
-0.0
+0.3
-0.0
+0.3
+0.1
carbon source
L-Arabinose
-0.1
+0.1
+0.2
+0.3
+0.2
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