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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
MCAODC_14085 and yfaU are separated by 67 nucleotides
yfaU and yfaD are separated by 40 nucleotides
yfaD and glpC are separated by 192 nucleotides
glpC and glpB overlap by 4 nucleotides
MCAODC_14085: MCAODC_14085 - MFS transporter, at 2,758,905 to 2,759,657
_14085
MCAODC_14090: yfaU - 2-keto-3-deoxy-L-rhamnonate aldolase, at 2,759,725 to 2,760,477
yfaU
MCAODC_14095: yfaD - ISNCY family transposase, at 2,760,518 to 2,761,444
yfaD
MCAODC_14100: glpC - anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC, at 2,761,637 to 2,762,827
glpC
MCAODC_14105: glpB - glycerol-3-phosphate dehydrogenase subunit GlpB, at 2,762,824 to 2,764,083
glpB
Group
Condition
MCAODC
_14085
MCAODC
_14090
MCAODC
_14095
MCAODC
_14100
MCAODC
_14105
yfaU
yfaD
glpC
glpB
phage
Bas14
-0.7
-1.0
-0.1
+0.6
+0.1
phage
EV240
-0.2
-0.1
-0.6
+0.0
-0.2
phage
Bas14
-0.5
-0.4
-0.1
+0.2
-0.1
no phage control
Control_ECRC101_WM
-0.3
+0.1
-0.3
-0.2
-0.2
phage
WM_RB68
-0.2
-0.1
-0.1
-0.1
-0.3
phage
WM_EV240
-0.3
+0.1
+0.0
-0.2
-0.3
phage
WM_Bas09
-0.6
-0.1
+0.3
-0.2
-0.2
phage
WM_Bas41
-0.0
+0.0
+0.2
-0.5
-0.4
phage
Bas09
-0.2
-0.0
+0.2
-0.0
-0.3
phage
EV240
-0.3
-0.6
+0.1
+0.4
+0.1
phage
TP9
-0.4
-0.0
+0.2
+0.4
-0.4
carbon source
D-Glucose
-0.3
+0.3
+0.1
-0.1
-0.2
phage
WM_EV240
-0.1
+0.1
+0.2
-0.1
-0.4
phage
Bas09
-0.1
-0.2
-0.1
+0.1
+0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.2
+0.1
-0.0
phage
WM_TP9
+0.1
+0.0
+0.0
-0.1
-0.2
phage
WM_TP9
-0.4
+0.3
+0.0
+0.2
-0.1
carbon source
D-Glucose
-0.3
+0.2
+0.2
+0.1
-0.0
phage
WM_Bas09
+0.1
+0.1
+0.0
+0.1
-0.1
phage
WM_Bas14
+0.1
+0.3
+0.1
+0.1
-0.2
carbon source
Casamino-acids
-0.1
+0.2
+0.1
+0.1
+0.1
carbon source
Casamino-acids
+0.0
+0.2
+0.5
-0.3
+0.1
carbon source
L-Arabinose
+0.3
+0.1
+0.3
-0.0
-0.0
carbon source
L-Arabinose
+0.3
+0.0
+0.1
+0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.3
+0.3
+0.4
+0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.3
+0.2
+0.1
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