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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
arnA and arnC overlap by 1 nucleotides
arnC and arnB are separated by 3 nucleotides
arnB and ais are separated by 289 nucleotides
ais and nudI are separated by 38 nucleotides
MCAODC_14025: arnA - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 2,747,186 to 2,749,168
arnA
MCAODC_14030: arnC - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 2,749,168 to 2,750,136
arnC
MCAODC_14035: arnB - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 2,750,140 to 2,751,297
arnB
MCAODC_14040: ais - Lipopolysaccharide core heptose(II)-phosphate phosphatase, at 2,751,587 to 2,752,189
ais
MCAODC_14045: nudI - nucleoside triphosphatase NudI, at 2,752,228 to 2,752,653
nudI
Group
Condition
MCAODC
_14025
MCAODC
_14030
MCAODC
_14035
MCAODC
_14040
MCAODC
_14045
arnA
arnC
arnB
ais
nudI
phage
EV240
-0.2
+0.3
+0.2
-0.4
-1.0
phage
TP9
-0.4
+0.1
-0.1
+0.8
-0.7
phage
Bas09
-0.2
-0.2
-0.4
+0.2
+0.2
phage
WM_TP9
-0.0
+0.1
+0.1
-0.2
-0.2
phage
WM_TP9
+0.1
-0.1
-0.1
-0.2
+0.0
phage
WM_Bas09
+0.2
-0.1
+0.2
-0.0
-0.5
phage
Bas09
-0.5
+0.2
-0.1
+0.3
-0.2
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.1
-0.1
+0.1
phage
WM_Bas09
+0.1
-0.2
+0.0
+0.1
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.0
+0.1
+0.1
-0.1
carbon source
D-Glucose
+0.3
-0.1
+0.0
-0.3
+0.1
carbon source
L-Arabinose
+0.2
+0.0
-0.0
-0.2
+0.1
carbon source
Casamino-acids
+0.1
+0.1
+0.0
-0.0
-0.0
phage
WM_RB68
-0.0
-0.1
+0.1
+0.0
+0.2
phage
WM_Bas14
+0.1
+0.1
+0.1
-0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.2
+0.1
-0.2
+0.0
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.1
-0.1
+0.0
phage
Bas14
-0.4
+0.2
+0.1
+0.5
+0.2
carbon source
Casamino-acids
+0.0
+0.0
+0.1
+0.0
+0.3
phage
WM_Bas41
-0.2
-0.1
+0.0
+0.4
+0.6
carbon source
D-Glucose
+0.1
-0.1
+0.1
+0.3
+0.3
phage
Bas14
-0.2
-0.1
-0.1
+0.3
+0.9
phage
WM_EV240
+0.4
+0.2
+0.3
+0.3
-0.3
phage
WM_EV240
+0.3
+0.1
-0.1
+0.3
+0.4
carbon source
L-Arabinose
+0.3
+0.2
+0.2
+0.2
+0.4
phage
EV240
+0.1
+0.5
+0.3
-0.0
+0.6
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