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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
menC and menE overlap by 4 nucleotides
menE and pmrD are separated by 109 nucleotides
pmrD and arnF overlap by 7 nucleotides
arnF and arnE overlap by 1 nucleotides
MCAODC_13990: menC - o-succinylbenzoate synthase, at 2,741,245 to 2,742,207
menC
MCAODC_13995: menE - o-succinylbenzoate--CoA ligase, at 2,742,204 to 2,743,559
menE
MCAODC_14000: pmrD - signal transduction protein PmrD, at 2,743,669 to 2,743,935
pmrD
MCAODC_14005: arnF - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF, at 2,743,929 to 2,744,315
arnF
MCAODC_14010: arnE - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 2,744,315 to 2,744,650
arnE
Group
Condition
MCAODC
_13990
MCAODC
_13995
MCAODC
_14000
MCAODC
_14005
MCAODC
_14010
menC
menE
pmrD
arnF
arnE
phage
WM_EV240
-0.3
-0.4
+0.1
-4.2
-4.3
phage
EV240
-0.1
-0.3
+0.1
-3.2
-2.6
phage
EV240
-0.5
-0.6
-0.1
-2.5
-1.8
phage
WM_EV240
-0.1
+0.2
+0.1
-2.5
-3.0
phage
Bas09
-0.0
-0.1
-0.1
-2.6
-2.1
phage
Bas09
-0.6
-0.2
-0.0
-1.9
-1.9
phage
TP9
-0.2
-0.5
-0.0
-0.5
-0.1
phage
WM_Bas14
-0.2
-0.0
-0.2
-0.3
-0.4
phage
WM_Bas09
+0.1
-0.1
-0.3
-0.3
-0.4
phage
Bas14
-0.1
-0.4
-0.1
+0.0
-0.2
phage
WM_RB68
+0.0
-0.1
+0.1
-0.3
-0.4
no phage control
Control_ECRC101_WM
-0.1
-0.2
-0.1
-0.0
-0.2
no phage control
Control_ECRC101_WM
-0.1
-0.0
-0.0
-0.1
-0.3
phage
WM_Bas09
-0.2
-0.2
+0.0
-0.2
-0.0
phage
WM_TP9
-0.2
+0.0
-0.4
+0.1
+0.1
phage
WM_Bas41
-0.2
+0.0
-0.5
-0.4
+0.7
carbon source
Casamino-acids
-0.2
+0.2
-0.3
+0.1
-0.1
phage
Bas14
-0.2
-0.2
-0.0
-0.0
+0.2
carbon source
L-Arabinose
+0.3
-0.2
-0.3
+0.1
+0.0
phage
WM_TP9
+0.1
+0.3
-0.2
-0.1
+0.2
carbon source
D-Glucose
+0.2
+0.2
-0.4
+0.5
+0.0
carbon source
L-Arabinose
+0.2
+0.0
-0.1
+0.4
+0.0
carbon source
Sodium-DL-Lactate
-0.1
+0.2
-0.3
+0.3
+0.3
carbon source
D-Glucose
+0.2
+0.3
-0.1
+0.4
-0.2
carbon source
Sodium-DL-Lactate
+0.2
-0.1
-0.1
+0.5
+0.2
carbon source
Casamino-acids
+0.3
+0.3
-0.1
+0.6
+0.4
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