Fitness for 5 genes in Escherichia coli ECRC101

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500 ntmenC and menE overlap by 4 nucleotidesmenE and pmrD are separated by 109 nucleotidespmrD and arnF overlap by 7 nucleotidesarnF and arnE overlap by 1 nucleotides MCAODC_13990: menC - o-succinylbenzoate synthase, at 2,741,245 to 2,742,207 menC MCAODC_13995: menE - o-succinylbenzoate--CoA ligase, at 2,742,204 to 2,743,559 menE MCAODC_14000: pmrD - signal transduction protein PmrD, at 2,743,669 to 2,743,935 pmrD MCAODC_14005: arnF - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF, at 2,743,929 to 2,744,315 arnF MCAODC_14010: arnE - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 2,744,315 to 2,744,650 arnE
Group Condition MCAODC_13990 MCAODC_13995 MCAODC_14000 MCAODC_14005 MCAODC_14010
menC menE pmrD arnF arnE
phage WM_EV240 -0.3 -0.4 +0.1 -4.2 -4.3
phage EV240 -0.1 -0.3 +0.1 -3.2 -2.6
phage EV240 -0.5 -0.6 -0.1 -2.5 -1.8
phage WM_EV240 -0.1 +0.2 +0.1 -2.5 -3.0
phage Bas09 -0.0 -0.1 -0.1 -2.6 -2.1
phage Bas09 -0.6 -0.2 -0.0 -1.9 -1.9
phage TP9 -0.2 -0.5 -0.0 -0.5 -0.1
phage WM_Bas14 -0.2 -0.0 -0.2 -0.3 -0.4
phage WM_Bas09 +0.1 -0.1 -0.3 -0.3 -0.4
phage Bas14 -0.1 -0.4 -0.1 +0.0 -0.2
phage WM_RB68 +0.0 -0.1 +0.1 -0.3 -0.4
no phage control Control_ECRC101_WM -0.1 -0.2 -0.1 -0.0 -0.2
no phage control Control_ECRC101_WM -0.1 -0.0 -0.0 -0.1 -0.3
phage WM_Bas09 -0.2 -0.2 +0.0 -0.2 -0.0
phage WM_TP9 -0.2 +0.0 -0.4 +0.1 +0.1
phage WM_Bas41 -0.2 +0.0 -0.5 -0.4 +0.7
carbon source Casamino-acids -0.2 +0.2 -0.3 +0.1 -0.1
phage Bas14 -0.2 -0.2 -0.0 -0.0 +0.2
carbon source L-Arabinose +0.3 -0.2 -0.3 +0.1 +0.0
phage WM_TP9 +0.1 +0.3 -0.2 -0.1 +0.2
carbon source D-Glucose +0.2 +0.2 -0.4 +0.5 +0.0
carbon source L-Arabinose +0.2 +0.0 -0.1 +0.4 +0.0
carbon source Sodium-DL-Lactate -0.1 +0.2 -0.3 +0.3 +0.3
carbon source D-Glucose +0.2 +0.3 -0.1 +0.4 -0.2
carbon source Sodium-DL-Lactate +0.2 -0.1 -0.1 +0.5 +0.2
carbon source Casamino-acids +0.3 +0.3 -0.1 +0.6 +0.4
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