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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
menH and menB are separated by 14 nucleotides
menB and menC overlap by 1 nucleotides
menC and menE overlap by 4 nucleotides
menE and pmrD are separated by 109 nucleotides
MCAODC_13980: menH - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase, at 2,739,615 to 2,740,373
menH
MCAODC_13985: menB - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 2,740,388 to 2,741,245
menB
MCAODC_13990: menC - o-succinylbenzoate synthase, at 2,741,245 to 2,742,207
menC
MCAODC_13995: menE - o-succinylbenzoate--CoA ligase, at 2,742,204 to 2,743,559
menE
MCAODC_14000: pmrD - signal transduction protein PmrD, at 2,743,669 to 2,743,935
pmrD
Group
Condition
MCAODC
_13980
MCAODC
_13985
MCAODC
_13990
MCAODC
_13995
MCAODC
_14000
menH
menB
menC
menE
pmrD
phage
WM_EV240
-0.3
-0.5
-0.3
-0.4
+0.1
phage
EV240
-0.2
+0.3
-0.5
-0.6
-0.1
no phage control
Control_ECRC101_WM
-0.1
-0.4
-0.1
-0.2
-0.1
phage
Bas14
+0.1
-0.6
-0.2
-0.2
-0.0
phage
TP9
-0.0
-0.1
-0.2
-0.5
-0.0
phage
WM_TP9
-0.2
-0.0
-0.2
+0.0
-0.4
phage
Bas14
-0.4
+0.3
-0.1
-0.4
-0.1
phage
WM_Bas14
-0.4
+0.1
-0.2
-0.0
-0.2
phage
Bas09
-0.1
+0.2
-0.6
-0.2
-0.0
phage
WM_Bas09
-0.2
-0.2
-0.2
-0.2
+0.0
phage
WM_Bas09
-0.1
-0.3
+0.1
-0.1
-0.3
no phage control
Control_ECRC101_WM
-0.3
-0.1
-0.1
-0.0
-0.0
phage
WM_EV240
-0.0
-0.6
-0.1
+0.2
+0.1
carbon source
Casamino-acids
-0.1
+0.1
-0.2
+0.2
-0.3
phage
Bas09
-0.0
-0.1
-0.0
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.0
-0.1
+0.2
-0.3
carbon source
L-Arabinose
-0.0
+0.0
+0.3
-0.2
-0.3
phage
WM_Bas41
+0.2
+0.2
-0.2
+0.0
-0.5
carbon source
D-Glucose
+0.0
-0.2
+0.2
+0.2
-0.4
phage
EV240
-0.3
+0.6
-0.1
-0.3
+0.1
phage
WM_RB68
+0.1
-0.0
+0.0
-0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.2
-0.1
-0.1
phage
WM_TP9
+0.0
+0.1
+0.1
+0.3
-0.2
carbon source
Casamino-acids
+0.1
-0.2
+0.3
+0.3
-0.1
carbon source
D-Glucose
+0.2
+0.0
+0.2
+0.3
-0.1
carbon source
L-Arabinose
+0.2
+0.3
+0.2
+0.0
-0.1
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