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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
rpnB and yfcH are separated by 47 nucleotides
yfcH and folX are separated by 20 nucleotides
folX and yfcG are separated by 56 nucleotides
yfcG and yfcF are separated by 135 nucleotides
MCAODC_13790: rpnB - recombination-promoting nuclease RpnB, at 2,698,011 to 2,698,901
rpnB
MCAODC_13795: yfcH - Epimerase family protein YfcH, at 2,698,949 to 2,699,842
yfcH
MCAODC_13800: folX - dihydroneopterin triphosphate 2'-epimerase, at 2,699,863 to 2,700,225
folX
MCAODC_13805: yfcG - GSH-dependent disulfide bond oxidoreductase, at 2,700,282 to 2,700,929
yfcG
MCAODC_13810: yfcF - glutathione transferase, at 2,701,065 to 2,701,709
yfcF
Group
Condition
MCAODC
_13790
MCAODC
_13795
MCAODC
_13800
MCAODC
_13805
MCAODC
_13810
rpnB
yfcH
folX
yfcG
yfcF
phage
Bas14
-0.1
-0.0
-0.5
+0.1
-0.3
phage
WM_RB68
-0.2
-0.2
-0.1
-0.0
-0.1
phage
WM_Bas09
-0.2
-0.3
-0.0
-0.2
+0.2
no phage control
Control_ECRC101_WM
-0.0
-0.1
-0.2
-0.1
-0.1
phage
EV240
-0.1
-0.2
+0.1
-0.1
-0.0
carbon source
D-Glucose
-0.4
-0.1
-0.1
+0.0
+0.1
phage
Bas09
+0.1
-0.3
-0.1
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.3
-0.3
+0.2
+0.1
carbon source
D-Glucose
+0.2
-0.0
-0.5
-0.1
+0.0
phage
WM_EV240
-0.0
-0.1
+0.0
-0.3
+0.0
phage
EV240
+0.4
-0.1
-0.1
+0.0
-0.5
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-0.2
-0.1
-0.1
carbon source
Casamino-acids
-0.1
+0.1
-0.1
-0.0
-0.1
phage
TP9
-0.2
-0.2
+0.2
+0.2
-0.3
carbon source
Casamino-acids
+0.0
-0.2
+0.3
-0.2
-0.1
phage
WM_TP9
+0.3
-0.2
-0.2
-0.2
+0.2
carbon source
L-Arabinose
+0.1
-0.1
-0.2
+0.0
+0.1
no phage control
Control_ECRC101_WM
+0.2
-0.2
+0.1
-0.0
-0.0
phage
WM_Bas41
+0.4
+0.1
-0.2
-0.1
-0.1
carbon source
L-Arabinose
-0.2
+0.1
+0.2
-0.0
+0.0
phage
WM_EV240
+0.3
-0.4
+0.5
-0.1
-0.1
phage
WM_Bas09
+0.1
-0.3
+0.4
-0.2
+0.1
phage
Bas14
+0.3
+0.3
-0.2
+0.1
+0.0
phage
Bas09
+0.1
+0.0
+0.2
+0.2
+0.1
phage
WM_TP9
-0.0
-0.0
+0.3
+0.2
+0.2
phage
WM_Bas14
+0.2
+0.1
+0.1
+0.1
+0.2
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