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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
fadJ and sixA are separated by 202 nucleotides
sixA and fimA are separated by 645 nucleotides
fimA and fimD are separated by 81 nucleotides
fimD and fimC are separated by 22 nucleotides
MCAODC_13590: fadJ - fatty acid oxidation complex subunit alpha FadJ, at 2,661,650 to 2,663,794
fadJ
MCAODC_13595: sixA - phosphohistidine phosphatase SixA, at 2,663,997 to 2,664,482
sixA
MCAODC_13600: fimA - fimbrial protein, at 2,665,128 to 2,665,691
fimA
MCAODC_13605: fimD - PapC/FimD family outer membrane usher protein, at 2,665,773 to 2,668,412
fimD
MCAODC_13610: fimC - fimbrial protein, at 2,668,435 to 2,669,193
fimC
Group
Condition
MCAODC
_13590
MCAODC
_13595
MCAODC
_13600
MCAODC
_13605
MCAODC
_13610
fadJ
sixA
fimA
fimD
fimC
phage
Bas09
-0.0
N.D.
-0.5
-0.3
-0.2
phage
TP9
-0.0
N.D.
-0.3
-0.2
-0.2
phage
Bas14
-0.3
N.D.
-0.2
-0.3
+0.3
phage
EV240
-0.1
N.D.
-0.2
-0.1
-0.1
phage
WM_Bas41
+0.1
N.D.
-0.5
+0.0
-0.1
phage
WM_Bas14
-0.1
N.D.
-0.3
-0.0
-0.1
phage
WM_Bas09
-0.1
N.D.
-0.1
-0.1
-0.2
carbon source
Casamino-acids
+0.0
N.D.
-0.2
-0.2
+0.0
phage
EV240
-0.0
N.D.
-0.1
-0.0
-0.2
phage
Bas09
-0.2
N.D.
+0.0
+0.1
-0.2
carbon source
Sodium-DL-Lactate
+0.0
N.D.
-0.1
-0.1
-0.0
phage
Bas14
-0.1
N.D.
-0.0
-0.1
+0.0
phage
WM_TP9
-0.0
N.D.
+0.1
-0.1
-0.1
phage
WM_RB68
-0.0
N.D.
+0.1
-0.1
-0.1
phage
WM_Bas09
-0.1
N.D.
+0.2
-0.1
-0.0
phage
WM_EV240
+0.1
N.D.
+0.2
-0.0
-0.2
phage
WM_TP9
-0.1
N.D.
+0.2
-0.0
+0.2
carbon source
D-Glucose
-0.0
N.D.
+0.3
+0.0
-0.1
phage
WM_EV240
-0.0
N.D.
+0.3
+0.1
-0.0
no phage control
Control_ECRC101_WM
+0.0
N.D.
+0.2
-0.1
+0.1
no phage control
Control_ECRC101_WM
+0.3
N.D.
+0.2
+0.0
+0.0
carbon source
L-Arabinose
+0.2
N.D.
-0.0
-0.0
+0.3
carbon source
D-Glucose
+0.1
N.D.
+0.5
-0.0
+0.1
carbon source
L-Arabinose
+0.2
N.D.
+0.5
+0.1
-0.1
carbon source
Sodium-DL-Lactate
+0.0
N.D.
+0.3
+0.1
+0.2
carbon source
Casamino-acids
+0.1
N.D.
+0.6
+0.1
+0.1
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