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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yfdV and MCAODC_12945 are separated by 73 nucleotides
MCAODC_12945 and yfdE are separated by 32 nucleotides
yfdE and evgS are separated by 55 nucleotides
evgS and evgA are separated by 4 nucleotides
MCAODC_12940: yfdV - transporter YfdV, at 2,566,647 to 2,567,591
yfdV
MCAODC_12945: MCAODC_12945 - CoA-transferase, at 2,567,665 to 2,567,895
_12945
MCAODC_12950: yfdE - CoA:oxalate CoA-transferase, at 2,567,928 to 2,568,806
yfdE
MCAODC_12955: evgS - acid-sensing system histidine kinase EvgS, at 2,568,862 to 2,572,455
evgS
MCAODC_12960: evgA - acid-sensing system DNA-binding response regulator EvgA, at 2,572,460 to 2,573,074
evgA
Group
Condition
MCAODC
_12940
MCAODC
_12945
MCAODC
_12950
MCAODC
_12955
MCAODC
_12960
yfdV
yfdE
evgS
evgA
phage
EV240
+0.0
+0.5
-0.0
-0.1
-1.9
no phage control
Control_ECRC101_WM
+0.1
-0.2
+0.1
-0.2
-1.2
phage
Bas14
-0.5
+0.2
-0.1
+0.0
-1.0
carbon source
Sodium-DL-Lactate
-0.1
-0.4
+0.1
+0.0
-0.6
carbon source
L-Arabinose
-0.1
-1.5
+0.5
+0.3
-0.1
phage
WM_EV240
+0.1
+0.1
+0.2
-0.0
-1.2
phage
WM_Bas41
-0.0
-1.0
+0.2
-0.2
+0.3
carbon source
L-Arabinose
-0.1
+0.5
+0.0
+0.2
-1.4
phage
WM_EV240
-0.2
-1.5
+0.2
+0.1
+0.7
phage
Bas09
+0.2
-0.9
+0.0
+0.0
+0.0
carbon source
Casamino-acids
+0.1
-0.1
+0.2
+0.3
-0.9
phage
WM_TP9
+0.3
-0.3
-0.1
-0.1
-0.0
carbon source
Casamino-acids
+0.0
-0.2
-0.2
-0.5
+0.6
phage
WM_RB68
-0.1
-0.2
+0.2
+0.0
+0.0
phage
EV240
-0.3
+0.8
+0.3
-0.4
-0.3
phage
TP9
+0.0
-0.1
-0.2
-0.1
+0.6
phage
WM_Bas09
+0.2
+0.3
+0.2
+0.1
-0.5
phage
WM_TP9
-0.1
+0.2
+0.1
+0.0
+0.2
phage
WM_Bas14
-0.0
+0.6
+0.0
+0.1
-0.2
phage
WM_Bas09
-0.2
+0.7
+0.1
+0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.4
-0.0
-0.1
+0.1
+0.5
no phage control
Control_ECRC101_WM
-0.0
+0.2
+0.2
+0.0
+0.8
phage
Bas14
-0.1
+1.0
-0.2
-0.0
+0.8
carbon source
D-Glucose
+0.3
-0.1
+0.1
+0.1
+1.2
phage
Bas09
+0.0
+0.9
+0.1
+0.2
+0.8
carbon source
D-Glucose
+0.4
+1.1
+0.0
+0.2
+1.3
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