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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ypdA and alaC are separated by 376 nucleotides
alaC and ypdK are separated by 64 nucleotides
ypdK and lpxP are separated by 370 nucleotides
lpxP and yfdY are separated by 352 nucleotides
MCAODC_12895: ypdA - two-component system sensor histidine kinase YpdA, at 2,556,464 to 2,558,161
ypdA
MCAODC_12900: alaC - alanine transaminase, at 2,558,538 to 2,559,776
alaC
MCAODC_12905: ypdK - membrane protein YpdK, at 2,559,841 to 2,559,897
ypdK
MCAODC_12910: lpxP - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 2,560,268 to 2,561,188
lpxP
MCAODC_12915: yfdY - Uncharacterized protein YfdY, at 2,561,541 to 2,561,783
yfdY
Group
Condition
MCAODC
_12895
MCAODC
_12900
MCAODC
_12905
MCAODC
_12910
MCAODC
_12915
ypdA
alaC
ypdK
lpxP
yfdY
phage
EV240
-0.0
-0.5
N.D.
-0.1
-0.5
phage
TP9
-0.3
+0.1
N.D.
-0.6
-0.0
phage
WM_TP9
-0.1
-0.3
N.D.
-0.2
-0.1
phage
EV240
-0.1
+0.1
N.D.
-0.2
-0.4
phage
WM_RB68
-0.0
-0.3
N.D.
-0.0
-0.0
phage
Bas09
+0.0
+0.0
N.D.
-0.2
-0.1
phage
Bas14
+0.1
+0.0
N.D.
-0.4
-0.0
no phage control
Control_ECRC101_WM
-0.0
-0.2
N.D.
+0.1
-0.2
phage
Bas14
-0.3
+0.2
N.D.
-0.3
+0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.0
N.D.
-0.0
-0.1
carbon source
Casamino-acids
-0.1
+0.2
N.D.
-0.1
-0.1
phage
WM_Bas09
-0.2
-0.3
N.D.
+0.0
+0.3
carbon source
L-Arabinose
+0.2
+0.1
N.D.
-0.1
-0.3
phage
WM_EV240
-0.1
-0.1
N.D.
+0.1
+0.1
carbon source
D-Glucose
-0.2
-0.0
N.D.
+0.3
-0.2
carbon source
Sodium-DL-Lactate
-0.0
+0.0
N.D.
+0.1
-0.1
phage
WM_TP9
-0.0
-0.2
N.D.
+0.2
+0.1
carbon source
D-Glucose
+0.1
-0.1
N.D.
+0.1
+0.1
phage
WM_Bas14
-0.0
-0.1
N.D.
-0.1
+0.4
phage
Bas09
-0.0
+0.0
N.D.
-0.2
+0.3
phage
WM_EV240
-0.1
-0.1
N.D.
+0.2
+0.2
no phage control
Control_ECRC101_WM
-0.0
+0.0
N.D.
+0.3
-0.1
phage
WM_Bas09
-0.1
+0.2
N.D.
+0.2
+0.1
carbon source
Casamino-acids
-0.1
+0.3
N.D.
+0.0
+0.2
phage
WM_Bas41
-0.1
+0.1
N.D.
+0.5
-0.0
carbon source
L-Arabinose
+0.0
+0.3
N.D.
+0.0
+0.4
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