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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
glk and fryB are separated by 218 nucleotides
fryB and fryC are separated by 21 nucleotides
fryC and ypdF are separated by 14 nucleotides
ypdF and ypdE overlap by 1 nucleotides
MCAODC_12855: glk - glucokinase, at 2,547,406 to 2,548,371
glk
MCAODC_12860: fryB - PTS system fructose-like EIIB component 1, at 2,548,590 to 2,548,916
fryB
MCAODC_12865: fryC - Fructose-like permease IIC component, at 2,548,938 to 2,550,185
fryC
MCAODC_12870: ypdF - aminopeptidase, at 2,550,200 to 2,551,285
ypdF
MCAODC_12875: ypdE - aminopeptidase, at 2,551,285 to 2,552,322
ypdE
Group
Condition
MCAODC
_12855
MCAODC
_12860
MCAODC
_12865
MCAODC
_12870
MCAODC
_12875
glk
fryB
fryC
ypdF
ypdE
phage
Bas14
-0.3
-1.1
-0.0
-0.0
-0.8
phage
EV240
-0.2
-1.3
-0.1
+0.2
-0.4
carbon source
Sodium-DL-Lactate
-0.2
-1.5
+0.2
+0.2
-0.2
phage
TP9
-0.7
+0.0
-0.2
-0.0
-0.5
phage
EV240
-0.4
-0.1
-0.4
-0.1
-0.4
phage
Bas09
-0.4
-0.6
-0.1
-0.0
-0.2
phage
Bas09
-0.3
-0.9
-0.0
+0.1
+0.0
carbon source
D-Glucose
-0.3
+0.0
-0.1
-0.1
-0.4
no phage control
Control_ECRC101_WM
-0.3
-0.1
-0.0
+0.1
-0.5
phage
Bas14
-0.2
+0.3
-0.3
-0.0
-0.4
no phage control
Control_ECRC101_WM
-0.2
-0.4
+0.0
+0.1
-0.2
phage
WM_Bas09
-0.1
-0.3
-0.1
+0.3
-0.3
carbon source
Casamino-acids
-0.4
+0.1
+0.0
-0.2
-0.1
phage
WM_EV240
+0.1
+0.3
-0.2
-0.3
-0.3
phage
WM_TP9
-0.3
-0.3
-0.0
+0.1
+0.1
phage
WM_RB68
-0.2
-0.1
-0.1
+0.0
-0.0
phage
WM_TP9
-0.1
+0.1
+0.0
-0.1
-0.3
phage
WM_Bas09
+0.3
-0.4
+0.0
-0.2
-0.0
carbon source
D-Glucose
+0.1
+0.2
+0.1
-0.1
-0.3
phage
WM_Bas41
-0.4
+0.4
-0.1
+0.2
-0.1
carbon source
Casamino-acids
+0.0
-0.2
+0.2
+0.1
-0.1
carbon source
L-Arabinose
+0.2
-0.9
+0.2
+0.3
+0.3
carbon source
Sodium-DL-Lactate
-0.3
+0.2
+0.2
+0.1
-0.1
phage
WM_EV240
-0.4
+0.6
-0.0
-0.0
-0.1
carbon source
L-Arabinose
+0.0
-0.0
+0.3
+0.1
-0.2
phage
WM_Bas14
+0.1
+0.1
-0.0
-0.0
+0.4
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