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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
nupC and ypeD are separated by 265 nucleotides
ypeD and mntH overlap by 20 nucleotides
mntH and ypeC are separated by 139 nucleotides
ypeC and yfeO are separated by 114 nucleotides
MCAODC_12830: nupC - nucleoside permease NupC, at 2,542,589 to 2,543,791
nupC
MCAODC_12835: ypeD - Protein YpeD, at 2,544,057 to 2,544,146
ypeD
MCAODC_12840: mntH - Mn(2+) uptake NRAMP transporter MntH, at 2,544,127 to 2,545,365
mntH
MCAODC_12845: ypeC - Uncharacterized protein YpeC, at 2,545,505 to 2,545,831
ypeC
MCAODC_12850: yfeO - ion channel protein, at 2,545,946 to 2,547,202
yfeO
Group
Condition
MCAODC
_12830
MCAODC
_12835
MCAODC
_12840
MCAODC
_12845
MCAODC
_12850
nupC
ypeD
mntH
ypeC
yfeO
phage
Bas14
-0.0
N.D.
-0.5
-0.8
+0.0
no phage control
Control_ECRC101_WM
-0.1
N.D.
-0.2
-0.6
-0.0
carbon source
Sodium-DL-Lactate
+0.0
N.D.
-0.7
-0.3
+0.2
carbon source
Casamino-acids
-0.2
N.D.
-0.2
+0.1
-0.2
phage
WM_TP9
+0.0
N.D.
-0.5
-0.0
+0.1
phage
WM_EV240
+1.0
N.D.
-0.5
-0.8
-0.2
phage
WM_Bas09
+0.1
N.D.
-0.2
-0.0
-0.2
phage
WM_TP9
+0.0
N.D.
-0.4
-0.0
+0.2
no phage control
Control_ECRC101_WM
-0.0
N.D.
-0.1
-0.0
-0.1
phage
TP9
+0.2
N.D.
-0.2
-0.3
+0.2
phage
WM_RB68
+0.1
N.D.
-0.1
-0.1
-0.1
phage
Bas14
+0.0
N.D.
-0.3
+0.1
+0.1
phage
WM_Bas09
+0.3
N.D.
-0.2
-0.0
-0.1
phage
Bas09
+0.1
N.D.
-0.2
-0.1
+0.2
phage
Bas09
+0.4
N.D.
+0.1
-0.2
-0.1
carbon source
D-Glucose
+0.1
N.D.
-0.1
-0.2
+0.2
phage
WM_Bas41
+0.0
N.D.
-0.4
+0.1
+0.5
phage
WM_Bas14
+0.0
N.D.
-0.2
+0.2
+0.2
carbon source
Casamino-acids
+0.2
N.D.
+0.0
+0.0
-0.0
carbon source
D-Glucose
+0.3
N.D.
-0.2
+0.0
+0.2
carbon source
L-Arabinose
+0.4
N.D.
-0.5
+0.3
+0.2
carbon source
Sodium-DL-Lactate
+0.3
N.D.
-0.3
-0.0
+0.5
carbon source
L-Arabinose
+0.3
N.D.
-0.0
+0.3
-0.1
phage
EV240
+0.7
N.D.
+0.1
+0.0
-0.3
phage
WM_EV240
+0.6
N.D.
+0.0
+0.2
-0.0
phage
EV240
+0.6
N.D.
+0.0
+0.1
+0.2
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