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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
murP and murQ are separated by 3 nucleotides
murQ and murR are separated by 163 nucleotides
murR and ucpA are separated by 128 nucleotides
ucpA and cysP are separated by 157 nucleotides
MCAODC_12660: murP - PTS N-acetylmuramic acid transporter subunit IIBC, at 2,513,583 to 2,515,007
murP
MCAODC_12665: murQ - N-acetylmuramic acid 6-phosphate etherase, at 2,515,011 to 2,515,907
murQ
MCAODC_12670: murR - HTH-type transcriptional regulator MurR, at 2,516,071 to 2,516,928
murR
MCAODC_12675: ucpA - SDR family oxidoreductase UcpA, at 2,517,057 to 2,517,848
ucpA
MCAODC_12680: cysP - thiosulfate/sulfate ABC transporter substrate-binding protein CysP, at 2,518,006 to 2,519,022
cysP
Group
Condition
MCAODC
_12660
MCAODC
_12665
MCAODC
_12670
MCAODC
_12675
MCAODC
_12680
murP
murQ
murR
ucpA
cysP
phage
EV240
-0.5
-0.2
-0.0
-1.3
+0.1
carbon source
L-Arabinose
+0.2
-0.2
-0.3
-0.3
-1.3
carbon source
Casamino-acids
-0.3
-0.1
-0.0
-1.1
-0.1
carbon source
Sodium-DL-Lactate
+0.3
+0.1
-0.5
-0.4
-1.1
phage
EV240
-0.2
-0.3
-0.1
-0.9
-0.0
carbon source
D-Glucose
+0.0
+0.1
+0.0
-0.4
-1.1
carbon source
Sodium-DL-Lactate
+0.0
+0.0
-0.4
+0.1
-0.9
carbon source
D-Glucose
+0.1
+0.0
-0.2
-0.2
-0.8
phage
WM_EV240
-0.2
-0.3
-0.9
+0.4
-0.1
carbon source
L-Arabinose
+0.2
-0.0
-0.1
+0.0
-1.1
phage
WM_EV240
-0.1
+0.0
-0.3
+0.1
-0.0
phage
WM_Bas41
+0.0
-0.2
+0.1
-0.1
-0.1
phage
TP9
-0.1
-0.0
+0.1
-0.1
-0.2
phage
WM_Bas09
+0.2
-0.1
-0.4
+0.1
-0.0
phage
WM_TP9
+0.2
-0.3
-0.0
+0.2
-0.1
phage
WM_RB68
+0.0
-0.2
-0.2
+0.3
-0.0
no phage control
Control_ECRC101_WM
+0.1
+0.1
-0.1
+0.1
-0.2
phage
Bas14
-0.1
+0.1
+0.1
+0.1
-0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.0
+0.2
+0.0
phage
WM_TP9
+0.2
-0.2
-0.1
+0.4
-0.0
phage
Bas09
-0.0
+0.2
+0.1
+0.1
+0.1
phage
Bas09
-0.0
+0.2
+0.4
+0.0
-0.1
phage
Bas14
+0.2
+0.2
+0.3
-0.2
-0.1
phage
WM_Bas14
+0.1
-0.1
-0.0
+0.5
+0.1
phage
WM_Bas09
+0.0
+0.2
+0.1
+0.3
-0.0
carbon source
Casamino-acids
+0.2
+0.1
+0.1
+0.1
+0.2
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