Fitness for 5 genes in Escherichia coli ECRC101

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500 ntypfM and acrD are separated by 98 nucleotidesacrD and narQ are separated by 163 nucleotidesnarQ and aegA are separated by 205 nucleotidesaegA and nudK are separated by 67 nucleotides MCAODC_12495: ypfM - protein YpfM, at 2,477,975 to 2,478,034 ypfM MCAODC_12500: acrD - multidrug efflux RND transporter permease AcrD, at 2,478,133 to 2,481,246 acrD MCAODC_12505: narQ - nitrate/nitrite two-component system sensor histidine kinase NarQ, at 2,481,410 to 2,483,110 narQ MCAODC_12510: aegA - formate-dependent uric acid utilization protein AegA, at 2,483,316 to 2,485,295 aegA MCAODC_12515: nudK - GDP-mannose pyrophosphatase NudK, at 2,485,363 to 2,485,938 nudK
Group Condition MCAODC_12495 MCAODC_12500 MCAODC_12505 MCAODC_12510 MCAODC_12515
ypfM acrD narQ aegA nudK
phage Bas09 -1.6 -0.1 -0.2 -0.4 -0.2
phage TP9 -2.0 +0.1 -0.1 +0.0 -0.1
phage WM_Bas41 -1.8 -0.1 +0.0 +0.3 +0.3
phage EV240 -1.1 -0.0 +0.1 -0.0 +0.1
phage Bas14 -0.3 -0.0 -0.3 -0.3 +0.2
phage WM_RB68 -0.6 +0.0 -0.0 -0.0 +0.1
no phage control Control_ECRC101_WM -0.5 +0.2 -0.0 -0.0 -0.1
carbon source L-Arabinose -0.7 +0.2 -0.1 -0.0 +0.2
phage WM_Bas09 -0.3 +0.0 +0.0 -0.1 +0.0
phage EV240 -0.6 -0.1 +0.0 -0.1 +0.4
phage Bas09 -0.3 -0.0 -0.0 +0.0 +0.0
no phage control Control_ECRC101_WM -0.2 +0.1 -0.1 +0.1 -0.1
phage WM_TP9 -0.1 +0.2 -0.1 -0.1 -0.1
phage WM_EV240 -0.8 +0.1 +0.0 +0.2 +0.4
phage WM_EV240 -0.1 +0.0 +0.0 -0.0 +0.0
phage WM_Bas14 +0.3 +0.1 -0.2 -0.2 -0.0
carbon source Sodium-DL-Lactate -0.1 -0.0 +0.1 +0.0 +0.1
phage Bas14 +0.6 -0.1 -0.0 -0.2 +0.3
phage WM_Bas09 +0.8 +0.0 +0.0 -0.2 +0.1
phage WM_TP9 +0.3 +0.2 +0.1 +0.1 +0.2
carbon source D-Glucose +0.5 +0.1 +0.1 +0.2 +0.2
carbon source D-Glucose +0.3 +0.3 +0.1 +0.4 +0.1
carbon source L-Arabinose +0.3 +0.3 +0.3 +0.5 +0.0
carbon source Sodium-DL-Lactate +0.7 +0.1 +0.2 +0.2 +0.3
carbon source Casamino-acids +0.9 +0.1 +0.2 +0.3 -0.0
carbon source Casamino-acids +0.8 +0.2 +0.2 +0.2 +0.3
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