Fitness for 5 genes in Escherichia coli ECRC101

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500 ntdmsB and dmsC overlap by 8 nucleotidesdmsC and dsrA overlap by 1 nucleotidesdsrA and ndk are separated by 140 nucleotidesndk and rlmN are separated by 149 nucleotides MCAODC_12220: dmsB - dimethylsulfoxide reductase subunit B, at 2,421,522 to 2,422,151 dmsB MCAODC_12225: dmsC - dimethyl sulfoxide reductase, at 2,422,144 to 2,422,965 dmsC MCAODC_12230: dsrA - ferredoxin, at 2,422,965 to 2,423,819 dsrA MCAODC_12235: ndk - nucleoside-diphosphate kinase, at 2,423,960 to 2,424,391 ndk MCAODC_12240: rlmN - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN, at 2,424,541 to 2,425,695 rlmN
Group Condition MCAODC_12220 MCAODC_12225 MCAODC_12230 MCAODC_12235 MCAODC_12240
dmsB dmsC dsrA ndk rlmN
phage WM_Bas09 -0.2 -0.0 +0.1 -0.9 -0.1
phage WM_Bas41 -0.2 -0.1 +0.3 -0.9 -0.2
no phage control Control_ECRC101_WM +0.0 +0.2 +0.1 -1.2 +0.0
carbon source Sodium-DL-Lactate -0.4 -0.1 -0.1 -0.5 +0.2
phage WM_Bas14 +0.0 +0.0 +0.0 -0.9 +0.1
no phage control Control_ECRC101_WM -0.1 -0.0 -0.2 -0.5 +0.0
phage Bas09 -0.2 -0.3 -0.0 -0.4 +0.1
phage Bas14 +0.1 -0.1 -0.5 -0.4 +0.3
phage WM_EV240 -0.4 -0.1 +0.2 -0.6 +0.4
phage WM_RB68 -0.2 -0.2 -0.2 +0.0 -0.1
carbon source L-Arabinose +0.0 +0.1 -0.1 -0.6 -0.0
phage Bas09 +0.0 -0.0 +0.0 -0.8 +0.4
phage Bas14 +0.1 -0.2 +0.0 -0.4 +0.3
carbon source D-Glucose +0.3 +0.2 +0.1 -0.6 +0.1
carbon source Sodium-DL-Lactate -0.0 +0.1 +0.1 -0.1 +0.2
carbon source Casamino-acids -0.2 +0.1 -0.1 +0.4 +0.1
phage WM_Bas09 -0.0 +0.1 +0.2 +0.1 +0.0
carbon source D-Glucose +0.0 +0.2 +0.2 -0.1 +0.1
carbon source Casamino-acids -0.4 +0.2 +0.0 +0.7 -0.1
carbon source L-Arabinose +0.2 +0.1 +0.2 +0.1 -0.1
phage WM_EV240 +0.1 +0.0 -0.4 +0.4 +0.4
phage WM_TP9 +0.1 +0.1 +0.3 +0.1 +0.1
phage EV240 +0.3 -0.2 -0.2 +0.0 +0.6
phage EV240 +0.1 +0.1 -0.3 +0.1 +0.7
phage WM_TP9 -0.2 +0.1 +0.2 +0.6 +0.1
phage TP9 +0.4 +0.3 +0.3 +0.4 +0.2
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