Fitness for 5 genes in Escherichia coli ECRC101

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500 ntdoxX and hcaD are separated by 96 nucleotideshcaD and hcaB are separated by 9 nucleotideshcaB and hcaC overlap by 4 nucleotideshcaC and hcaF overlap by 1 nucleotides MCAODC_12085: doxX - DoxX, at 2,390,696 to 2,391,118 doxX MCAODC_12090: hcaD - phenylpropionate dioxygenase ferredoxin reductase subunit, at 2,391,215 to 2,392,417 hcaD MCAODC_12095: hcaB - 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase, at 2,392,427 to 2,393,239 hcaB MCAODC_12100: hcaC - bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit, at 2,393,236 to 2,393,556 hcaC MCAODC_12105: hcaF - 3-phenylpropionate/cinnamic acid dioxygenase subunit beta, at 2,393,556 to 2,394,074 hcaF
Group Condition MCAODC_12085 MCAODC_12090 MCAODC_12095 MCAODC_12100 MCAODC_12105
doxX hcaD hcaB hcaC hcaF
phage EV240 -0.1 -0.0 +0.0 -0.2 -0.9
phage WM_EV240 -0.1 -0.2 -0.2 +0.2 -0.4
phage WM_Bas14 -0.2 -0.0 -0.2 +0.1 -0.3
no phage control Control_ECRC101_WM -0.0 -0.0 -0.1 -0.0 -0.4
phage WM_EV240 +0.0 +0.0 +0.1 +0.1 -0.7
phage WM_RB68 -0.0 -0.1 -0.1 +0.0 -0.2
phage Bas09 +0.0 -0.1 +0.3 -0.1 -0.4
phage EV240 +0.1 -0.2 +0.4 -0.3 -0.4
phage WM_Bas09 -0.1 -0.0 -0.2 +0.1 -0.1
carbon source Sodium-DL-Lactate -0.1 -0.1 +0.0 -0.2 +0.0
phage Bas14 +0.1 -0.2 +0.1 -0.1 -0.2
phage WM_Bas09 -0.1 +0.1 -0.2 +0.0 -0.1
carbon source Casamino-acids +0.0 +0.0 +0.0 -0.7 +0.4
phage WM_Bas41 +0.0 +0.2 -0.2 -0.4 +0.1
phage Bas14 +0.1 -0.2 +0.1 +0.0 -0.1
phage Bas09 +0.1 -0.1 -0.1 +0.2 -0.1
carbon source D-Glucose -0.1 -0.1 -0.0 -0.2 +0.4
no phage control Control_ECRC101_WM +0.2 -0.0 -0.2 +0.3 -0.2
carbon source D-Glucose -0.0 +0.1 +0.3 -0.3 +0.1
phage WM_TP9 +0.0 +0.1 +0.1 +0.2 -0.1
carbon source Casamino-acids -0.1 -0.0 +0.3 +0.0 +0.2
carbon source Sodium-DL-Lactate -0.0 +0.0 -0.1 +0.1 +0.3
phage WM_TP9 +0.1 +0.2 +0.1 +0.1 +0.1
carbon source L-Arabinose +0.2 +0.1 +0.2 +0.0 +0.2
carbon source L-Arabinose +0.2 +0.1 +0.2 +0.0 +0.4
phage TP9 +0.1 -0.0 +0.3 +0.7 +0.2
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