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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
yphF and ccmA are separated by 22 nucleotides
ccmA and yphD are separated by 24 nucleotides
yphD and yphC are separated by 65 nucleotides
yphC and MCAODC_12075 are separated by 42 nucleotides
MCAODC_12055: yphF - ABC transporter periplasmic-binding protein YphF, at 2,385,097 to 2,386,080
yphF
MCAODC_12060: ccmA - heme ABC exporter ATP-binding protein CcmA, at 2,386,103 to 2,387,614
ccmA
MCAODC_12065: yphD - putative ABC transporter permease protein YphD, at 2,387,639 to 2,388,637
yphD
MCAODC_12070: yphC - Uncharacterized zinc-type alcohol dehydrogenase-like protein YphC, at 2,388,703 to 2,388,894
yphC
MCAODC_12075: MCAODC_12075 - Alcohol dehydrogenase, at 2,388,937 to 2,389,764
_12075
Group
Condition
MCAODC
_12055
MCAODC
_12060
MCAODC
_12065
MCAODC
_12070
MCAODC
_12075
yphF
ccmA
yphD
yphC
phage
Bas14
-0.3
+0.0
+0.1
-0.3
+0.0
phage
Bas14
-0.6
+0.4
-0.1
+0.0
-0.1
phage
WM_Bas41
-0.2
+0.2
+0.1
-0.0
-0.3
phage
Bas09
-0.2
+0.0
+0.0
+0.2
-0.1
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.1
+0.1
-0.2
phage
WM_EV240
-0.2
-0.1
+0.3
+0.1
-0.2
phage
Bas09
-0.5
+0.2
+0.1
+0.2
-0.0
carbon source
D-Glucose
+0.1
+0.0
-0.2
-0.0
+0.1
carbon source
Casamino-acids
+0.0
-0.1
-0.0
+0.2
-0.1
phage
WM_Bas09
-0.1
-0.1
+0.1
+0.1
+0.1
phage
WM_TP9
-0.2
+0.1
+0.3
-0.1
+0.1
phage
WM_RB68
+0.1
+0.1
+0.1
-0.0
-0.0
carbon source
L-Arabinose
+0.0
+0.0
-0.0
+0.2
+0.1
no phage control
Control_ECRC101_WM
-0.0
-0.0
+0.1
+0.3
-0.1
phage
WM_EV240
+0.0
+0.2
-0.2
+0.3
+0.1
phage
EV240
-0.2
+0.0
+0.4
+0.2
-0.1
carbon source
Sodium-DL-Lactate
+0.0
+0.1
+0.1
-0.0
+0.2
phage
WM_Bas14
+0.2
+0.2
-0.1
-0.1
+0.2
phage
EV240
-0.3
+0.3
+0.4
+0.4
-0.4
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.2
+0.1
+0.1
carbon source
L-Arabinose
-0.2
+0.4
+0.0
+0.1
+0.3
phage
TP9
-0.0
+0.1
+0.2
+0.1
+0.3
carbon source
Casamino-acids
+0.5
+0.2
+0.2
-0.3
+0.3
phage
WM_Bas09
+0.6
+0.2
-0.0
-0.0
+0.1
phage
WM_TP9
+0.2
-0.0
+0.3
+0.3
+0.2
carbon source
D-Glucose
+0.3
+0.3
+0.1
+0.3
+0.3
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