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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
pdxJ and acpS overlap by 1 nucleotides
acpS and shoB are separated by 421 nucleotides
shoB and yfhL are separated by 193 nucleotides
yfhL and yfhH are separated by 55 nucleotides
MCAODC_11955: pdxJ - pyridoxine 5'-phosphate synthase, at 2,362,852 to 2,363,583
pdxJ
MCAODC_11960: acpS - Holo-[acyl-carrier-protein] synthase, at 2,363,583 to 2,363,963
acpS
MCAODC_11970: shoB - Small toxic protein ShoB, at 2,364,385 to 2,364,465
shoB
MCAODC_11975: yfhL - 4Fe-4S dicluster ferredoxin YfhL, at 2,364,659 to 2,364,919
yfhL
MCAODC_11980: yfhH - MurR/RpiR family transcriptional regulator, at 2,364,975 to 2,365,823
yfhH
Group
Condition
MCAODC
_11955
MCAODC
_11960
MCAODC
_11970
MCAODC
_11975
MCAODC
_11980
pdxJ
acpS
shoB
yfhL
yfhH
carbon source
Casamino-acids
-4.0
N.D.
-0.7
-0.6
+0.6
phage
WM_EV240
-0.6
N.D.
-3.8
+0.3
+0.0
carbon source
Sodium-DL-Lactate
-2.4
N.D.
-0.4
-0.5
+0.1
carbon source
L-Arabinose
-2.3
N.D.
-1.0
+0.4
+0.2
carbon source
Sodium-DL-Lactate
-1.5
N.D.
-1.4
-0.0
+0.2
phage
WM_Bas41
-1.1
N.D.
-1.5
-0.2
+0.1
carbon source
Casamino-acids
-1.1
N.D.
-1.6
-0.0
+0.2
carbon source
D-Glucose
-3.0
N.D.
+0.4
-0.0
+0.3
carbon source
L-Arabinose
-2.1
N.D.
+0.1
-0.1
+0.3
phage
Bas14
-1.4
N.D.
+0.5
-0.3
-0.5
phage
TP9
-0.6
N.D.
-1.3
+0.7
-0.1
phage
WM_Bas09
-0.1
N.D.
-1.4
+0.2
+0.1
carbon source
D-Glucose
-1.1
N.D.
+0.0
-0.1
-0.0
phage
EV240
-0.8
N.D.
-0.1
-0.3
+0.1
phage
WM_TP9
-0.1
N.D.
-1.1
+0.1
+0.2
phage
Bas14
-0.4
N.D.
-0.1
+0.3
+0.0
phage
Bas09
-0.0
N.D.
+0.8
-0.7
-0.1
phage
WM_Bas09
+0.7
N.D.
-0.7
+0.4
-0.1
no phage control
Control_ECRC101_WM
-0.7
N.D.
+1.1
+0.2
-0.2
phage
WM_RB68
+0.1
N.D.
+0.3
+0.3
-0.2
no phage control
Control_ECRC101_WM
+0.6
N.D.
+0.3
-0.5
-0.1
phage
WM_EV240
+0.5
N.D.
-0.1
-0.1
+0.1
phage
WM_Bas14
-0.4
N.D.
+0.6
+0.2
+0.2
phage
Bas09
+0.2
N.D.
+0.3
+0.5
-0.1
phage
WM_TP9
-0.1
N.D.
+0.6
+0.2
+0.3
phage
EV240
+0.7
N.D.
+1.4
-0.2
+0.1
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