Fitness for 5 genes in Escherichia coli ECRC101

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500 ntratA and rnfH overlap by 11 nucleotidesrnfH and bamE are separated by 61 nucleotidesbamE and recN are separated by 148 nucleotidesrecN and nadK are separated by 85 nucleotides MCAODC_11655: ratA - type II toxin-antitoxin system toxin RatA, at 2,310,222 to 2,310,671 ratA MCAODC_11660: rnfH - RnfH family protein, at 2,310,661 to 2,310,951 rnfH MCAODC_11665: bamE - outer membrane protein assembly factor BamE, at 2,311,013 to 2,311,354 bamE MCAODC_11670: recN - DNA repair protein RecN, at 2,311,503 to 2,313,164 recN MCAODC_11675: nadK - NAD(+) kinase, at 2,313,250 to 2,314,128 nadK
Group Condition MCAODC_11655 MCAODC_11660 MCAODC_11665 MCAODC_11670 MCAODC_11675
ratA rnfH bamE recN nadK
phage Bas14 N.D. -1.9 -1.0 +0.0 N.D.
phage Bas14 N.D. -1.5 -0.5 +0.0 N.D.
phage WM_Bas41 N.D. -1.4 +0.1 -0.0 N.D.
no phage control Control_ECRC101_WM N.D. -0.9 -0.0 -0.3 N.D.
phage TP9 N.D. -0.4 -0.1 -0.7 N.D.
carbon source Sodium-DL-Lactate N.D. -0.6 -0.2 -0.3 N.D.
phage WM_Bas09 N.D. -1.4 +0.5 -0.1 N.D.
carbon source Sodium-DL-Lactate N.D. -0.5 -0.2 -0.3 N.D.
carbon source L-Arabinose N.D. -0.4 -0.4 -0.2 N.D.
carbon source Casamino-acids N.D. -0.2 -0.7 -0.1 N.D.
phage Bas09 N.D. -0.7 +0.1 -0.1 N.D.
phage WM_TP9 N.D. -0.6 +0.1 -0.3 N.D.
phage WM_EV240 N.D. -1.0 +0.2 +0.2 N.D.
phage WM_RB68 N.D. -0.7 +0.0 -0.0 N.D.
phage EV240 N.D. -2.4 +1.5 +0.2 N.D.
carbon source L-Arabinose N.D. -0.3 -0.4 +0.1 N.D.
carbon source Casamino-acids N.D. -0.0 -0.3 -0.3 N.D.
carbon source D-Glucose N.D. -0.2 -0.1 -0.1 N.D.
no phage control Control_ECRC101_WM N.D. -0.4 +0.0 -0.1 N.D.
phage WM_TP9 N.D. -0.2 +0.2 -0.4 N.D.
phage WM_Bas14 N.D. -0.4 +0.0 -0.0 N.D.
phage WM_EV240 N.D. -0.9 +0.6 +0.1 N.D.
phage WM_Bas09 N.D. -0.0 -0.2 -0.0 N.D.
carbon source D-Glucose N.D. +0.4 -0.1 -0.4 N.D.
phage EV240 N.D. -1.6 +1.6 +0.0 N.D.
phage Bas09 N.D. +0.1 +0.0 -0.1 N.D.
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