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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ratA and rnfH overlap by 11 nucleotides
rnfH and bamE are separated by 61 nucleotides
bamE and recN are separated by 148 nucleotides
recN and nadK are separated by 85 nucleotides
MCAODC_11655: ratA - type II toxin-antitoxin system toxin RatA, at 2,310,222 to 2,310,671
ratA
MCAODC_11660: rnfH - RnfH family protein, at 2,310,661 to 2,310,951
rnfH
MCAODC_11665: bamE - outer membrane protein assembly factor BamE, at 2,311,013 to 2,311,354
bamE
MCAODC_11670: recN - DNA repair protein RecN, at 2,311,503 to 2,313,164
recN
MCAODC_11675: nadK - NAD(+) kinase, at 2,313,250 to 2,314,128
nadK
Group
Condition
MCAODC
_11655
MCAODC
_11660
MCAODC
_11665
MCAODC
_11670
MCAODC
_11675
ratA
rnfH
bamE
recN
nadK
phage
Bas14
N.D.
-1.9
-1.0
+0.0
N.D.
phage
Bas14
N.D.
-1.5
-0.5
+0.0
N.D.
phage
WM_Bas41
N.D.
-1.4
+0.1
-0.0
N.D.
no phage control
Control_ECRC101_WM
N.D.
-0.9
-0.0
-0.3
N.D.
phage
TP9
N.D.
-0.4
-0.1
-0.7
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.6
-0.2
-0.3
N.D.
phage
WM_Bas09
N.D.
-1.4
+0.5
-0.1
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.5
-0.2
-0.3
N.D.
carbon source
L-Arabinose
N.D.
-0.4
-0.4
-0.2
N.D.
carbon source
Casamino-acids
N.D.
-0.2
-0.7
-0.1
N.D.
phage
Bas09
N.D.
-0.7
+0.1
-0.1
N.D.
phage
WM_TP9
N.D.
-0.6
+0.1
-0.3
N.D.
phage
WM_EV240
N.D.
-1.0
+0.2
+0.2
N.D.
phage
WM_RB68
N.D.
-0.7
+0.0
-0.0
N.D.
phage
EV240
N.D.
-2.4
+1.5
+0.2
N.D.
carbon source
L-Arabinose
N.D.
-0.3
-0.4
+0.1
N.D.
carbon source
Casamino-acids
N.D.
-0.0
-0.3
-0.3
N.D.
carbon source
D-Glucose
N.D.
-0.2
-0.1
-0.1
N.D.
no phage control
Control_ECRC101_WM
N.D.
-0.4
+0.0
-0.1
N.D.
phage
WM_TP9
N.D.
-0.2
+0.2
-0.4
N.D.
phage
WM_Bas14
N.D.
-0.4
+0.0
-0.0
N.D.
phage
WM_EV240
N.D.
-0.9
+0.6
+0.1
N.D.
phage
WM_Bas09
N.D.
-0.0
-0.2
-0.0
N.D.
carbon source
D-Glucose
N.D.
+0.4
-0.1
-0.4
N.D.
phage
EV240
N.D.
-1.6
+1.6
+0.0
N.D.
phage
Bas09
N.D.
+0.1
+0.0
-0.1
N.D.
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