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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
aRO8 and ygaM are separated by 149 nucleotides
ygaM and ygaC are separated by 151 nucleotides
ygaC and alaE are separated by 36 nucleotides
alaE and stpA are separated by 667 nucleotides
MCAODC_11375: aRO8 - DNA-binding transcriptional regulator, at 2,260,813 to 2,262,147
aRO8
MCAODC_11380: ygaM - Uncharacterized protein YgaM, at 2,262,297 to 2,262,626
ygaM
MCAODC_11385: ygaC - DUF2002 domain-containing protein, at 2,262,778 to 2,263,122
ygaC
MCAODC_11390: alaE - L-alanine exporter AlaE, at 2,263,159 to 2,263,608
alaE
MCAODC_11395: stpA - DNA-binding protein StpA, at 2,264,276 to 2,264,680
stpA
Group
Condition
MCAODC
_11375
MCAODC
_11380
MCAODC
_11385
MCAODC
_11390
MCAODC
_11395
aRO8
ygaM
ygaC
alaE
stpA
phage
Bas09
+0.2
-0.7
+0.3
+0.0
N.D.
phage
WM_Bas41
+0.1
-0.4
+0.0
+0.1
N.D.
phage
WM_EV240
+0.0
-0.4
+0.5
-0.2
N.D.
phage
WM_TP9
+0.1
-0.1
+0.0
-0.0
N.D.
carbon source
Casamino-acids
-0.3
+0.1
-0.0
+0.2
N.D.
phage
WM_Bas09
+0.4
-0.3
-0.2
+0.2
N.D.
phage
EV240
-0.2
+0.1
-0.1
+0.3
N.D.
phage
WM_Bas14
+0.4
-0.4
+0.2
+0.1
N.D.
no phage control
Control_ECRC101_WM
+0.1
+0.4
-0.2
-0.0
N.D.
carbon source
Casamino-acids
+0.2
+0.3
-0.1
-0.0
N.D.
phage
Bas09
-0.1
-0.0
+0.2
+0.3
N.D.
carbon source
D-Glucose
+0.2
+0.1
+0.0
-0.0
N.D.
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.2
-0.1
N.D.
phage
Bas14
+0.2
+0.1
+0.0
+0.0
N.D.
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.1
+0.2
N.D.
no phage control
Control_ECRC101_WM
+0.2
+0.2
-0.2
+0.2
N.D.
phage
TP9
-0.1
+0.4
+0.2
+0.1
N.D.
carbon source
D-Glucose
+0.2
+0.0
+0.4
-0.0
N.D.
carbon source
L-Arabinose
+0.2
+0.4
+0.2
-0.1
N.D.
phage
WM_RB68
+0.1
+0.4
-0.1
+0.2
N.D.
phage
WM_Bas09
+0.4
+0.3
+0.1
-0.1
N.D.
phage
EV240
-0.0
+0.1
+0.3
+0.5
N.D.
phage
WM_TP9
+0.1
+0.4
+0.5
-0.1
N.D.
phage
WM_EV240
+0.1
+0.4
+0.6
+0.1
N.D.
carbon source
L-Arabinose
+0.3
+0.8
+0.2
+0.0
N.D.
phage
Bas14
+0.0
+0.6
+0.4
+0.3
N.D.
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