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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
proX and proW are separated by 56 nucleotides
proW and proV overlap by 8 nucleotides
proV and nrdF are separated by 355 nucleotides
nrdF and nrdE are separated by 9 nucleotides
MCAODC_11335: proX - glycine betaine/L-proline ABC transporter substrate-binding protein ProX, at 2,252,683 to 2,253,675
proX
MCAODC_11340: proW - glycine betaine/L-proline ABC transporter permease ProW, at 2,253,732 to 2,254,796
proW
MCAODC_11345: proV - glycine betaine/L-proline ABC transporter ATP-binding protein ProV, at 2,254,789 to 2,255,991
proV
MCAODC_11350: nrdF - class 1b ribonucleoside-diphosphate reductase subunit beta, at 2,256,347 to 2,257,306
nrdF
MCAODC_11355: nrdE - class 1b ribonucleoside-diphosphate reductase subunit alpha, at 2,257,316 to 2,259,460
nrdE
Group
Condition
MCAODC
_11335
MCAODC
_11340
MCAODC
_11345
MCAODC
_11350
MCAODC
_11355
proX
proW
proV
nrdF
nrdE
phage
TP9
-0.2
+0.0
-0.1
-0.2
-0.0
phage
Bas09
+0.2
+0.0
+0.0
-0.2
-0.2
phage
WM_RB68
+0.1
-0.1
-0.2
+0.0
+0.1
carbon source
L-Arabinose
+0.0
-0.2
-0.0
-0.0
+0.1
carbon source
L-Arabinose
-0.2
-0.1
+0.0
+0.1
+0.1
phage
WM_Bas14
+0.2
-0.2
-0.0
-0.1
+0.1
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.2
+0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.0
-0.3
-0.0
+0.2
+0.2
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.0
+0.2
-0.0
carbon source
D-Glucose
-0.1
+0.0
+0.1
-0.0
+0.1
carbon source
Casamino-acids
+0.0
+0.0
+0.0
-0.1
+0.2
phage
WM_TP9
+0.1
+0.2
+0.1
-0.1
+0.0
phage
WM_TP9
+0.3
+0.1
-0.1
-0.1
+0.1
phage
WM_Bas09
+0.1
+0.2
-0.0
+0.2
-0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.2
-0.0
+0.1
carbon source
Casamino-acids
+0.2
+0.0
-0.2
+0.3
+0.1
phage
WM_Bas41
+0.1
+0.4
+0.0
-0.1
+0.2
phage
WM_Bas09
+0.1
+0.1
+0.2
+0.1
+0.1
phage
WM_EV240
+0.5
+0.3
+0.2
-0.1
-0.0
phage
Bas14
+0.5
+0.1
+0.4
-0.1
-0.1
carbon source
D-Glucose
+0.3
+0.2
-0.2
+0.4
+0.1
phage
Bas09
+0.2
+0.5
+0.5
-0.2
+0.1
phage
Bas14
+0.6
+0.3
+0.5
-0.0
+0.0
phage
WM_EV240
+0.5
+0.8
+0.6
+0.1
+0.2
phage
EV240
+1.2
+1.3
+0.9
+0.0
+0.1
phage
EV240
+1.3
+1.6
+1.2
-0.2
-0.1
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