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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
luxS and emrB are separated by 63 nucleotides
emrB and emrA are separated by 16 nucleotides
emrA and emrR are separated by 126 nucleotides
emrR and ygaH are separated by 90 nucleotides
MCAODC_11295: luxS - S-ribosylhomocysteine lyase, at 2,246,067 to 2,246,582
luxS
MCAODC_11300: emrB - multidrug efflux MFS transporter permease subunit EmrB, at 2,246,646 to 2,248,184
emrB
MCAODC_11305: emrA - multidrug efflux MFS transporter periplasmic adaptor subunit EmrA, at 2,248,201 to 2,249,373
emrA
MCAODC_11310: emrR - multidrug efflux transporter EmrAB transcriptional repressor EmrR, at 2,249,500 to 2,250,030
emrR
MCAODC_11315: ygaH - L-valine transporter subunit YgaH, at 2,250,121 to 2,250,456
ygaH
Group
Condition
MCAODC
_11295
MCAODC
_11300
MCAODC
_11305
MCAODC
_11310
MCAODC
_11315
luxS
emrB
emrA
emrR
ygaH
phage
Bas09
-0.3
-0.0
-0.1
-4.8
-1.1
phage
WM_Bas09
-0.3
-0.2
-0.0
-3.3
-1.7
no phage control
Control_ECRC101_WM
+0.0
-0.2
-0.1
-3.8
-1.1
phage
Bas09
-0.4
-0.0
-0.0
-4.1
-0.4
phage
EV240
-0.1
-0.5
-0.3
-4.7
+0.8
phage
EV240
+0.2
-0.4
-0.4
-4.6
+0.4
phage
Bas14
-0.1
-0.3
-0.3
-3.3
-0.5
phage
WM_Bas09
-0.1
-0.0
-0.0
-3.4
-0.8
phage
Bas14
-0.3
-0.0
-0.2
-3.1
-0.6
no phage control
Control_ECRC101_WM
-0.7
-0.1
-0.1
-2.0
-0.3
phage
WM_Bas14
-0.1
+0.1
-0.0
-1.6
-0.7
phage
WM_EV240
-0.6
-0.3
-0.0
-1.0
-0.3
phage
WM_EV240
+0.1
-0.4
-0.3
-0.9
-0.3
carbon source
Casamino-acids
-0.7
-0.1
-0.0
-0.9
+0.3
phage
WM_Bas41
-0.7
-0.0
-0.1
-0.5
-0.0
phage
WM_RB68
+0.1
-0.1
-0.0
-0.7
-0.1
carbon source
Sodium-DL-Lactate
-0.5
+0.0
+0.0
-0.1
+0.1
carbon source
L-Arabinose
-0.4
-0.1
-0.1
+0.1
+0.1
carbon source
D-Glucose
+0.1
-0.1
+0.0
+0.1
-0.5
carbon source
Sodium-DL-Lactate
+0.3
+0.2
-0.0
-0.6
-0.1
phage
WM_TP9
+0.1
-0.1
-0.0
+0.1
-0.2
phage
WM_TP9
-0.2
+0.0
+0.2
+0.0
-0.1
phage
TP9
-0.1
+0.2
+0.1
-0.2
+0.1
carbon source
Casamino-acids
-0.0
+0.1
-0.0
+0.1
-0.0
carbon source
D-Glucose
+0.1
+0.1
+0.0
-0.3
+0.4
carbon source
L-Arabinose
-0.1
+0.0
-0.1
+0.4
+0.2
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