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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
gutQ and srlR overlap by 8 nucleotides
srlR and gutM are separated by 66 nucleotides
gutM and srlD are separated by 105 nucleotides
srlD and srlB are separated by 3 nucleotides
MCAODC_11180: gutQ - arabinose-5-phosphate isomerase GutQ, at 2,230,252 to 2,231,217
gutQ
MCAODC_11185: srlR - glucitol operon DNA-binding transcriptional repressor SrlR, at 2,231,210 to 2,231,983
srlR
MCAODC_11190: gutM - transcriptional regulator GutM, at 2,232,050 to 2,232,409
gutM
MCAODC_11195: srlD - sorbitol-6-phosphate dehydrogenase, at 2,232,515 to 2,233,294
srlD
MCAODC_11200: srlB - PTS glucitol/sorbitol transporter subunit IIA, at 2,233,298 to 2,233,669
srlB
Group
Condition
MCAODC
_11180
MCAODC
_11185
MCAODC
_11190
MCAODC
_11195
MCAODC
_11200
gutQ
srlR
gutM
srlD
srlB
phage
WM_EV240
-0.0
-0.0
-0.1
-0.1
-3.4
phage
EV240
+0.4
-0.1
-0.1
-0.2
-2.7
phage
Bas14
-0.6
-0.0
+0.0
-0.1
-1.3
phage
Bas09
+0.0
-0.2
-0.7
+0.0
-0.5
no phage control
Control_ECRC101_WM
-0.1
+0.2
-0.3
-0.0
-0.8
phage
Bas14
-0.1
-0.1
+0.1
-0.1
-0.6
carbon source
D-Glucose
+0.2
-0.0
-0.2
+0.1
-0.7
no phage control
Control_ECRC101_WM
-0.2
-0.1
-0.2
+0.1
+0.1
phage
WM_RB68
-0.3
+0.2
-0.2
-0.0
+0.1
carbon source
L-Arabinose
+0.4
+0.0
-0.1
-0.1
-0.6
carbon source
L-Arabinose
+0.2
+0.1
-0.2
+0.0
-0.4
phage
Bas09
+0.3
-0.1
-0.3
-0.0
+0.0
phage
WM_Bas41
-0.0
-0.2
-0.2
+0.2
+0.2
phage
EV240
+0.4
-0.1
-0.1
-0.3
+0.0
phage
WM_EV240
+0.3
+0.1
-0.1
+0.1
-0.3
phage
WM_Bas14
-0.0
+0.0
-0.2
-0.0
+0.4
phage
WM_Bas09
-0.0
-0.0
+0.1
+0.1
+0.2
phage
TP9
-0.1
+0.2
+0.2
-0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
+0.1
-0.1
+0.5
carbon source
Casamino-acids
-0.1
-0.2
-0.1
+0.0
+0.8
phage
WM_TP9
+0.1
+0.0
+0.1
+0.0
+0.3
phage
WM_Bas09
-0.0
+0.0
-0.1
+0.0
+0.6
carbon source
Casamino-acids
-0.6
+0.1
-0.0
-0.1
+1.4
phage
WM_TP9
-0.1
+0.2
+0.0
+0.1
+0.6
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.2
-0.1
+0.5
carbon source
D-Glucose
+0.0
-0.0
-0.2
-0.0
+1.1
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