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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
hycB and hycC overlap by 4 nucleotides
hycC and hycD are separated by 2 nucleotides
hycD and hycE are separated by 17 nucleotides
hycE and hycF are separated by 9 nucleotides
MCAODC_11100: hycB - formate hydrogenlyase subunit HycB, at 2,211,216 to 2,211,827
hycB
MCAODC_11105: hycC - formate hydrogenlyase subunit 3, at 2,211,824 to 2,213,650
hycC
MCAODC_11110: hycD - formate hydrogenlyase subunit HycD, at 2,213,653 to 2,214,576
hycD
MCAODC_11115: hycE - formate hydrogenlyase subunit HycE, at 2,214,594 to 2,216,303
hycE
MCAODC_11120: hycF - formate hydrogenlyase subunit HycF, at 2,216,313 to 2,216,855
hycF
Group
Condition
MCAODC
_11100
MCAODC
_11105
MCAODC
_11110
MCAODC
_11115
MCAODC
_11120
hycB
hycC
hycD
hycE
hycF
phage
EV240
-0.4
-0.1
+0.2
-0.3
-0.0
phage
WM_TP9
-0.2
+0.0
-0.2
+0.1
-0.3
phage
WM_Bas09
-0.2
-0.1
+0.2
+0.0
-0.3
phage
WM_EV240
-0.1
+0.1
-0.2
+0.0
-0.1
phage
Bas14
-0.3
+0.1
-0.3
-0.1
+0.4
phage
Bas14
+0.4
-0.0
-0.5
-0.1
+0.1
no phage control
Control_ECRC101_WM
-0.1
-0.1
+0.5
-0.0
-0.5
carbon source
L-Arabinose
-0.6
+0.0
+0.6
-0.1
-0.0
carbon source
Casamino-acids
+0.0
+0.0
-0.6
+0.2
+0.2
phage
Bas09
-0.2
+0.0
+0.0
-0.0
+0.1
phage
WM_Bas14
+0.3
+0.1
-0.0
-0.1
-0.4
phage
WM_TP9
-0.0
+0.0
-0.2
+0.1
-0.0
phage
EV240
-0.3
+0.1
-0.5
-0.0
+0.8
no phage control
Control_ECRC101_WM
+0.1
-0.1
+0.0
-0.1
+0.1
phage
WM_RB68
+0.0
+0.0
+0.0
-0.1
+0.2
carbon source
L-Arabinose
+0.1
+0.1
-0.1
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.2
+0.1
-0.0
-0.0
+0.0
carbon source
Sodium-DL-Lactate
-0.4
-0.1
+0.6
+0.1
-0.0
phage
WM_Bas09
+0.1
+0.0
+0.2
-0.1
+0.2
carbon source
D-Glucose
+0.0
+0.2
+0.3
+0.2
-0.2
phage
TP9
-0.1
+0.0
+0.4
+0.1
+0.1
phage
WM_Bas41
+0.2
-0.1
+0.3
-0.1
+0.3
carbon source
D-Glucose
-0.2
+0.1
+0.6
-0.0
+0.2
carbon source
Casamino-acids
-0.3
+0.1
+0.4
-0.2
+0.7
phage
Bas09
+0.2
+0.1
+0.4
+0.1
+0.3
phage
WM_EV240
+0.2
-0.0
+0.3
+0.1
+0.5
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