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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
pphB and mutS are separated by 105 nucleotides
mutS and MCAODC_11055 are separated by 75 nucleotides
MCAODC_11055 and ygbA are separated by 76 nucleotides
ygbA and flhA are separated by 36 nucleotides
MCAODC_11045: pphB - protein-serine/threonine phosphatase, at 2,200,649 to 2,201,305
pphB
MCAODC_11050: mutS - DNA mismatch repair protein MutS, at 2,201,411 to 2,203,972
mutS
MCAODC_11055: MCAODC_11055 - hypothetical protein, at 2,204,048 to 2,204,182
_11055
MCAODC_11060: ygbA - nitrous oxide-stimulated promoter family protein, at 2,204,259 to 2,204,612
ygbA
MCAODC_11065: flhA - formate hydrogenlyase transcriptional activator FlhA, at 2,204,649 to 2,206,727
flhA
Group
Condition
MCAODC
_11045
MCAODC
_11050
MCAODC
_11055
MCAODC
_11060
MCAODC
_11065
pphB
mutS
ygbA
flhA
carbon source
Casamino-acids
+0.4
-0.1
-1.3
-0.1
+0.0
phage
WM_Bas09
+0.1
-0.1
-0.3
-0.0
-0.1
carbon source
D-Glucose
+0.1
-0.1
-0.1
-0.1
-0.0
no phage control
Control_ECRC101_WM
-0.2
-0.1
+0.0
+0.1
+0.1
phage
WM_EV240
+0.9
-0.0
-0.7
-0.4
-0.0
no phage control
Control_ECRC101_WM
+0.7
+0.0
-0.7
+0.0
-0.1
phage
Bas09
+0.9
-0.2
-0.7
+0.1
-0.1
carbon source
L-Arabinose
+0.3
-0.1
-0.2
-0.2
+0.2
phage
WM_EV240
+0.5
-0.1
-0.4
+0.2
-0.0
carbon source
L-Arabinose
+0.1
-0.1
-0.1
+0.1
+0.1
carbon source
D-Glucose
-0.1
-0.0
+0.1
+0.2
+0.1
phage
Bas09
+0.9
-0.0
-0.2
-0.3
-0.0
phage
WM_Bas41
-0.8
-0.1
+0.6
+0.6
+0.1
phage
WM_TP9
+0.8
+0.1
-0.3
-0.2
+0.0
phage
EV240
+0.8
-0.1
-0.3
+0.0
-0.1
carbon source
Sodium-DL-Lactate
+1.1
-0.1
-0.4
-0.1
-0.2
phage
WM_Bas14
+0.5
-0.1
-0.1
+0.2
+0.0
phage
WM_TP9
+0.8
+0.1
-0.2
-0.1
-0.1
carbon source
Sodium-DL-Lactate
+0.7
-0.1
-0.0
-0.0
+0.0
phage
Bas14
+1.3
-0.1
-0.1
-0.5
-0.0
phage
WM_Bas09
-0.0
-0.0
+0.2
+0.3
+0.2
phage
WM_RB68
+0.9
-0.1
-0.1
+0.1
-0.0
phage
EV240
+1.0
+0.0
-0.1
+0.2
-0.1
phage
TP9
+1.2
+0.1
-0.3
+0.4
-0.2
phage
Bas14
+1.6
-0.0
-0.2
-0.3
+0.1
carbon source
Casamino-acids
+0.7
-0.0
+0.4
+0.4
-0.0
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